Dinoroseobacter shibae: Dshi_2999
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Entry
Dshi_2999 CDS
T00612
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00280
Valine, leucine and isoleucine degradation
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dshi_2999 (fadD1)
Enzymes [BR:
dsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
Dshi_2999 (fadD1)
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABV94732
RoseoBase:
Dshi_2999
UniProt:
A8LKE9
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Position
complement(3164958..3166478)
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AA seq
506 aa
AA seq
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MTNPLYDALFGRNAGSDAPFLQLPGGDTLTHGGFVELAARYAATLTGLGLAPGDRLALQV
EKSPEALAVYAGCVQAGIVFLPLNTAYTPAEISYFVGNSGAKLVLCDPRAEAGLTPVAAE
AGAQLLTLAADGTGSFPDAAATAPATFETVARTEDDLAAFLYTSGTTGRSKGAMLSQRNL
LSNAEVLVDYWRFTDKDVLLHALPIFHTHGLFVGTNITLLAGGSMIFLPKFDAEAVLANL
PRATTMMGVPTFYTRLLAEDRFDRDLVAHMRLFVSGSAPLLAETHREFEARTGHRILERY
GMTETNMNTSNPYDGARRAGTVGFPLPGVELKVCDPDTGAELPQGEIGQIEVRGPNVFQG
YWQMPEKTAAELRADGFFITGDLGLIDDQGYVQIVGRGKDLIISGGYNIYPKEVELALDE
APGVLESAVIGAPHPDFGESVVGILVPQPGARIDTEAVAARLAGQLARFKQPRKLVVMDA
LPRNTMGKVQKNVLREQFADAFSEPA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacccgctctatgatgcccttttcggacgcaacgccggcagtgacgcccccttc
ctgcagctgcccggcggcgacaccctcacccatggcggcttcgtggagctcgccgcccgc
tacgccgccaccctgaccgggctgggccttgcccccggcgaccggctggccctgcaggtc
gaaaaatcccccgaggcgctggcggtctatgcgggctgcgtgcaggcgggcatcgtgttc
ctgccgctcaacaccgcctataccccggccgagatcagctatttcgtcggcaactccggt
gcgaaactcgtgctctgcgatccgcgcgccgaggccggtctcacccccgtcgcggccgag
gcgggcgcgcagcttctgacgctcgccgccgacggcaccggcagcttccccgacgccgcc
gccaccgcccccgccacgttcgagaccgtggcccggaccgaggacgacctcgccgccttc
ctctacacctccggcaccacgggccggtccaagggcgcgatgctcagccaacgcaacctg
ctcagcaacgccgaggtgctggtcgattactggcgcttcaccgacaaggacgtgctgctc
cacgccctgccgatcttccatacccacgggctgttcgtgggcaccaacatcacgctgctg
gcgggcgggtcgatgatcttcttgccgaaattcgacgccgaggcggtgctcgccaacctg
ccgcgtgccaccacgatgatgggcgtgccgaccttctacacccgcctgctggccgaggac
cggttcgatcgcgacctcgtcgcccatatgcggctcttcgtgtccggctccgcgccgctt
ctggccgaaacccaccgggagttcgaggcccgcaccggtcatcgcatcctcgaacgctac
ggcatgaccgagaccaacatgaacacctccaacccctatgacggcgcgcgccgggcgggc
accgtgggcttcccgctgccgggggtggagttgaaggtctgcgaccccgacaccggcgcc
gagctgccccagggcgagatcggccaaatcgaggtgcgcgggccgaacgtgttccagggc
tactggcagatgcccgagaaaaccgccgccgagctgcgcgcggacgggttcttcatcacc
ggcgacctcggcctgatcgacgaccagggctatgtgcagatcgtcggacgcggcaaggat
ctgatcatctcgggcggctacaacatctaccccaaggaggtggagctggccctcgacgag
gcccccggagtgctcgaatccgccgtgatcggcgcgccgcaccccgatttcggcgagagc
gtcgtcggcatcctcgtcccccaaccgggcgcgcggatcgacaccgaggcggtggcggca
cgcctcgccggacagctcgcccggttcaagcagccgcgcaagctggtggtgatggacgcg
ctgccgcgcaacaccatgggcaaggtgcagaagaacgtgctgcgcgagcaattcgccgac
gcgttttcggaaccggcctga
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