Dinoroseobacter shibae: Dshi_3229
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Entry
Dshi_3229 CDS
T00612
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_3229
Enzymes [BR:
dsh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Dshi_3229
Transfer RNA biogenesis [BR:
dsh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Dshi_3229
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABV94962
RoseoBase:
Dshi_3229
UniProt:
A8LMN7
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Position
3397932..3399182
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AA seq
416 aa
AA seq
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MTAPRFTTLGCRLNAYESEAMREMAEAAGLSDALVVNTCAVTAEAVRKSRQEIRRLRRDN
PDAPIIVTGCAAQTEPETFAAMPEVTRVLGNTEKMQPETWAALVPDLIGRTERVQVDDIM
SVRETAGHLIDGFGRHRAYVQVQNGCDHRCTFCIIPYGRGNSRSVPAGVVVDQIKRLVDR
GFNEVVLTGVDLTSWGADLPGTPRLGDLVMRILRLVPDLPRLRISSIDSIEADENLMRAI
ATEPRLMPHLHLSLQAGDDLILKRMKRRHLRDDAIAFCEEARRLRPEMTFGADIIAGFPT
ETEAMFENSLRLVTDCDLTWLHVFPYSPRKGTPAARMPAVPGAAIKDRAARLRALGATQV
ARHLAAQQGRTHKILIESPRLGRTEQFTEVAFAEDHPEGQIVEARITGIAGQRLAA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccgcgtttcaccactttgggctgccgcctcaatgcctacgagtccgaagcc
atgcgcgagatggccgaggccgcgggcctgtcggacgcgctggtggtcaacacctgtgcg
gtgaccgccgaagccgtgcgcaaatcccggcaggagatccgccgcctgcgccgcgacaac
cccgacgccccgatcattgtcaccggctgcgccgcccagaccgagcccgaaaccttcgcc
gccatgcccgaggtcacccgcgtcctcggcaataccgagaagatgcagcccgagacctgg
gcggcgctggtccccgacctcattggccggaccgagcgcgtgcaggtcgacgacatcatg
tcggtgcgcgagaccgccgggcatctgatcgacgggttcggccgccaccgcgcctatgtg
caggtccagaacggctgcgatcaccgctgcaccttctgcatcatcccctacgggcgcggc
aattcccgctccgtgccagccggcgtggtggtggaccagatcaagcggctggtggaccgg
ggcttcaacgaggtggtgctgaccggcgtggacctgacaagctggggcgcggacctgccc
ggcaccccgcggctgggcgatctggtgatgcgcatcctgcgcctggtgccggacctgccg
cgcctcaggatcagctccatcgacagtatcgaggcggacgagaacctgatgcgcgccatc
gcgaccgaaccgcgcctgatgccccatctgcacctgagcctgcaggccggggacgacctg
atcctcaaacggatgaaacgccgccacctgcgcgacgacgccatcgccttctgcgaagag
gcccgccgcctgcgccccgagatgaccttcggcgccgacatcatcgcgggctttccgacc
gagaccgaggcgatgttcgaaaactcgcttcggctggtcaccgactgcgacctgacctgg
ctgcacgtctttccctattcaccgcgcaagggcacccccgccgcccggatgcccgccgtc
ccgggtgctgcgatcaaggaccgcgccgcccgcctgcgggccctgggcgccacccaggtc
gcgcgccacctggccgcacaacagggccgaacccacaagatcctgatcgaatctccccgc
ctgggccggacagagcagttcaccgaggtcgccttcgccgaggaccaccccgagggccag
atcgtcgaagcccggatcaccggcatcgcaggacagcggctggcggcctga
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