KEGG   Dinoroseobacter shibae: Dshi_3998
Entry
Dshi_3998         CDS       T00612                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsh03400]
    Dshi_3998 (dnaE)
Enzymes [BR:dsh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dshi_3998 (dnaE)
DNA repair and recombination proteins [BR:dsh03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Dshi_3998 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 tRNA_anti-codon PHP tRNA_anti_2
Other DBs
NCBI-ProteinID: ABV95725
RoseoBase: Dshi_3998
UniProt: A8LU17
LinkDB
Position
pDSHI03:60274..63624
AA seq 1116 aa
MTGYAELCVTSNFTFLTGASHPEELVTRAAELGLKAIAITDRNSVAGVVRAFSALKELAR
LREEARAASDGAEAGPVVRSRQVTDHSSRQTMQHMPAGDAPRIPPDMVLPKLIPGARIVL
TDSPVDWLALPADIAAWSRLTRLLSLGKRRATKGECHLTRKDLLDWGEGMVLIALPPDPM
EHPARASLSDLRHMLRIFPGQCFLGAAPRYDGRDPTRLDQLARIAQDTGLPLVALGEVMM
HRSSRRPLADVLTCLREGCTIDTIGERRLTNGEHRLKSPAEMARMFHRYPAAIRRTLEIA
DRCAFRLDDLRYQYPDEARDGEPAQARLERLSREGLHWRYPEGPPARIVTRVDKELKLIG
EMGYAPYFLTVHDIVAFARSKGILCQGRGSAANSVVCYLLGVTEVPPESITLIFERFISK
ERGEPPDIDVDFEHERREEVIQWIYEQYGRHRAGLTATVIHFRSRAAIREVGKVMGLSQD
VVARLSGQIWGWSSSAPGEDRMRDAGIDPADGRVALAAKLIGEIIGFPRHLSQHVGGFVI
THGRLDELCPIENAAMEDRTVIEWDKDDIDALGLLKVDVLALGMLTCIRKAFGLLDDHRH
LQLTLANVPPEDPVVYDMLCKADAVGVFQVESRAQLNFLPRMQPRKFYDLVCEVAIVRPG
PIQGGMVHPFINRRQGKEKVEDLGPAMMEVLGRTYGVPLFQEQAMQIAVVAAGFSAAEAD
RLRRSLATFKRMGTIGAFRERFISGMLARSYEAGFAERCFAQIEGFGSYGFPESHAASFA
RLVYISAWLKRHHPAVFTCALLNSQPMGFYAPAQLVRDAREHGVEIRAISVNHSAWDCTL
EPRGDGALALRLGFRQIKGMREEDANWIEAARGNGYPDVEGLWRRAGVRPDALERLAEGD
AFASLGLNRRDALWAARALRGPNPLPLFGADGEGGAEPEVALPAMTLGQEVIEDYLALRL
SLRAHPMELLRPRLPESLPHERLDRATGRVTVTGLVITRQRPGTASGVIFLTLEDETGVS
NVVVWSRVYEAFRKAVIAGRLLRVTGRIEREGQVVHVIAERIEDISPMLSSLGRPATDAG
DRQAEAAHQPASSGGGSTARHPREQAKKLFPSRDFH
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgaccggttatgcggagctctgcgtgacgagcaatttcaccttcctgaccggcgcctcg
catcctgaggagctggtcacgcgggctgccgaactgggtctgaaggccatcgccatcacc
gaccgcaactcggtggcaggcgtggtgcgggccttctcggccctgaaagagctggcccga
ctgcgcgaggaggcccgtgcagcgagcgacggggccgaggccggaccagtggtccgatcc
cggcaagtgaccgatcattccagccgccagacgatgcagcacatgccggcaggcgatgcg
ccccgaattccgccggacatggtgttgccgaagctgatccctggcgcccggatcgtgctg
accgacagcccggtcgactggctcgccctacccgccgacatcgcggcctggtcgcggctg
acccggctcctgtccctcggcaagcggcgggccacgaaaggcgaatgccatctgacgcgc
aaggatctgttggattggggcgagggcatggtgctgatcgcgctgccgcctgacccaatg
gagcacccggcccgggcatctttaagcgacctgcggcatatgctgcgcatcttccccggc
cagtgctttcttggcgcggccccccgctatgacgggcgagacccaacccgcctcgaccag
ctggcccggatcgcccaggacaccggcctgccgctcgtggccctcggcgaggtgatgatg
catcgctcgtccaggcgtccgctcgccgatgtcctgacctgcctgcgcgagggctgcacg
atcgacacgatcggggagcgccggctgaccaatggcgagcaccggctcaaatccccggcc
gagatggcgcggatgttccatcgctatccggcggcgatccggcggacactggagatcgcc
gaccgctgcgctttccggctggacgatctgcgctatcagtatcccgacgaggcgcgagac
ggcgaacccgcgcaggcgcggctcgaacgattgtcgcgggaggggctgcactggcgctat
cccgaggggccgccggcccggatcgtcacgcgggtcgacaaggaactgaagctcatcggc
gagatgggctatgcaccgtatttcctgacggtccatgacatcgtggctttcgcgcgctcg
aagggcattctctgccagggccgcgggtcggccgccaactcggtcgtctgctacctgctc
ggcgtcaccgaagtgccccccgagagcatcaccctgatcttcgaacgcttcatctcgaag
gaacgcggtgagccgcctgatatcgacgtggatttcgagcacgagcggcgcgaggaagtg
atccaatggatctacgagcaatatggccggcatcgcgccgggctgactgcgaccgtgatc
catttccgttcacgcgccgcgatccgcgaggtcggcaaggtgatgggactgagccaggac
gtagtcgcccggctgtcggggcagatctggggctggtcgtccagcgcaccaggagaagat
cggatgcgcgacgccggaatcgatccggcagacgggcgcgtggcgctggcggcgaaactg
atcggtgagatcatcgggtttccccggcatctgagccaacatgtcggcggctttgtcatc
acccatggccgactcgacgagctctgccccatcgagaacgcggcaatggaagatcgcacg
gtcatcgaatgggacaaggacgatatcgacgcgcttgggctcctgaaggtcgatgtgttg
gcgctcggcatgttgacttgcatccggaaggccttcgggctgctggacgatcaccgtcac
ctgcagctgaccctcgccaatgtgccgcctgaggacccggtggtctatgacatgctctgc
aaggcggatgcggtcggggtcttccaggtcgagagccgggcacagctgaacttcttgccg
cgcatgcagccgcgaaaattctacgatctggtctgcgaggtcgcgatcgtccgccccggt
ccgatccagggcggcatggttcatcccttcatcaaccgccgtcagggcaaggagaaggtc
gaagacctcggtcctgccatgatggaagtactaggccggacctatggtgtccccctcttc
caggagcaggccatgcagatcgcggtggtcgcggccggcttttcggcggccgaggccgac
cggctgcgccggtcgctcgcaaccttcaagcggatgggcacgatcggcgcgttccgcgaa
cggttcatatcgggcatgttggcccgcagctatgaggcggggttcgcagaacgttgcttc
gcccagatcgaaggcttcggcagctatggcttccccgaaagccatgcggcgagtttcgcg
cggctggtctatatctcggcctggctgaagcggcaccatccggccgtgttcacctgcgcc
ctgctgaacagccagccgatgggcttctacgccccggctcagctggttcgcgacgcgcgt
gagcatggcgtcgagatccgggccatctcggtcaatcattcggcctgggactgcaccctg
gagccgcgcggtgacggggcgctggcgctgcggctcgggtttcggcagatcaaggggatg
cgggaggaggatgcgaactggattgaggccgcccgcggcaatggctaccccgatgttgag
ggcctctggcgccgggccggggtcaggcccgatgcactggaacggttggcagaaggggat
gccttcgcctcgctcggtctcaatcggcgcgatgcgctatgggccgcccgggcattgcga
gggccaaatcccctgccccttttcggggccgatggtgaaggcggggcggaaccggaggtt
gcgctgccggcgatgacgctgggccaggaggtgattgaggactacctggcactgcggctt
tctctgcgcgcccatcctatggaactgctccgaccgcgcctgccggaaagcctgccgcat
gaacggctggaccgggcgaccggacgggtcaccgtaacgggtctcgtgatcacgcggcaa
cggccgggtaccgcgtctggtgtcatctttctgacgctggaggatgagaccggcgtgtcc
aacgtggtggtctggagccgggtttacgaggccttccgcaaggcggtgatcgcagggcgt
ctgctacgggtcaccggcaggattgaacgcgaggggcaggtcgttcatgtgattgccgag
cggatcgaagacatctcgccgatgctctcaagcctcgggcggccggccaccgacgcaggt
gatcgtcaggctgaggcagcgcaccaacccgcaagtagtggcggcggatcaaccgcccgg
catccgcgtgagcaggccaagaagctgtttccgagccgggattttcactag

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