Dactylococcopsis salina: Dacsa_2843
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Entry
Dacsa_2843 CDS
T02378
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsl03009
]
Dacsa_2843
Enzymes [BR:
dsl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dacsa_2843
Ribosome biogenesis [BR:
dsl03009
]
Prokaryotic type
ribosomal protein modification factors
Dacsa_2843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AFZ51404
UniProt:
K9YWW3
LinkDB
All DBs
Position
complement(2926904..2928238)
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AA seq
444 aa
AA seq
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MLNIARMPEKPTIAISHLGCEKNRIDSEHMLGLLAQAGYQVDNNEELADYVIVNTCSFIE
AAREESVRTLVELAEADQKILITGCLAQHFQEELLEEIPEALAVVGTGDYGKIVDVIERV
ETGERVKEISDEPTYIADETVPRYRTTSEAVAYLRVAEGCDYACAFCIIPHLRGKQRSRP
IESIVKEAHSLAAQGVKEIVLISQITTNYGVDLYGEPKLAELLRALGEVDVPWVRMHYSY
PTGLTPKVIKAIQETPNVLPYLDLPLQHSHPDILRAMNRPWQGRVNDGIIRRLREALPEA
VLRTTFIVGFPGETEEHFQHLCDFVARHQFDLMGAFTFSPEVGTKAYDLPQQLSQEVMEE
RRDRLMALQQPIAARQNQACVGETVDVLIEQGKPSTGEFIGRSARFAPDVDGLVYLQGKA
PLGSMVKAKITHADVYDLYGTIEA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatattgcacgaatgccagaaaaaccgacgattgcgatttctcatctaggttgt
gaaaaaaaccgtatcgactctgaacatatgttaggcttactcgctcaagcgggctatcag
gtcgataataacgaagaactcgccgattatgtaattgtaaacacctgtagttttattgaa
gccgcgcgagaagaatcggtgcgaaccttagtagaactcgcagaagcggatcagaaaatt
ctgattacgggatgtttagcccaacatttccaagaagaattgttagaagaaattcccgaa
gctctcgccgttgttggaacaggggattatgggaaaattgttgatgtgattgagcgggtg
gaaactggagagcgtgttaaggaaatcagcgatgaacccacttatattgctgacgaaact
gttcctcgttatcgcaccaccagcgaagcagttgcttatttacgggtagcagaaggttgt
gattatgcttgtgccttttgtattattccccatttacgcggtaagcaacgatcgcgcccc
attgagtcaattgtaaaggaagcgcacagtttagccgctcagggagttaaagaaatcgtc
ctgatttcacagattaccaccaactacggcgttgatctctatggtgaaccgaaactagcg
gaattattacgagcattaggagaggtggatgtgccttgggtgcggatgcactattcttat
cccactggactcacaccaaaagtgatcaaagcgattcaggaaacaccaaacgttcttcct
tatctggatttacccctacaacattcccatcctgatattttacgagcgatgaatcgtcct
tggcagggaagagtgaatgatgggattatccgtcgtttaagagaagctctcccagaagcg
gttttacgcacgacatttattgttggttttccaggggagacagaagagcattttcagcac
ttatgcgattttgtggcgcgtcatcagttcgatttaatgggcgcttttaccttttctcct
gaagtgggaacaaaagcctatgatttaccgcagcaactctcgcaagaagtgatggaagaa
cggcgcgatcgactgatggcgttacagcaaccgatcgccgcgcgacaaaatcaggcttgt
gttggggaaacggttgatgtgttgattgaacagggaaaaccgagtacaggagaatttatt
ggacgttcggcgcggtttgctcctgatgtggatggattagtgtatcttcagggaaaagcc
ccattaggaagcatggtgaaagcaaaaatcactcacgctgatgtttatgatttgtatggg
acaattgaagcctag
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