Dickeya solani IPO 2222: A4U42_04610
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Entry
A4U42_04610 CDS
T04410
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00053
Ascorbate and aldarate metabolism
dso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
A4U42_04610 (garD)
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
A4U42_04610 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
ANE74661
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All DBs
Position
1086907..1088481
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AA seq
524 aa
AA seq
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MSDNTTKGVASERPLYIKVHESDNVAIVVNNNGLKAGTRFSCGLELKEHVPQGHKVALSD
IALGASIVRYGEIIGYALRDIARGSWIDESLVALPNAPALETLPLATRVPPSLPPLEGYT
FEGYRNPDGSVGTKNLLGITTSVHCVAGVVDYVVTLIERDLLPRYPNVDGVVALNHLYGC
GVAINAPAAVVPIRTIHNLALNPNFGGEVLVVGLGCEKLQPERLLQGTPDVQAISLDDTS
IVRLQDEHHVGFKSMVDDILTMADKHLQQLNRRKREPVPASELVVGMQCGGSDAFSGVTA
NPAVGFASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEEVGKRLLEEMAWYDDYLDSG
KTDRSANPSPGNKKGGLANVVEKALGSIAKSGTSAIVEVLSPGQRPTRRGLIYAATPASD
FVCGTQQLASGITVQVFTTGRGTPYGLKAVPVIKMATRTALAERWHDLMDINAGTIATGE
ATIEDVGWQLFHFILDIASGRKKTWSDQWGLHNALSVFNPAPVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataacacaacaaagggtgtggccagtgagcggccgctttatatcaaggtccat
gagtctgacaatgttgccattgtcgttaacaataacggcctgaaagccggcacccgattc
agttgcggcctggaactgaaagaacacgtaccacagggccacaaggtcgcattaagcgat
atcgccctcggcgcgtccatcgtccgctatggcgaaatcatcggctacgccctcagggac
atcgcccgcggcagttggatcgatgagtcgctggtggcattgcccaacgccccggcgctg
gaaacgttgccgctggcgacccgggttccgccgtcactgccgccgctggaagggtacacc
tttgaaggctaccgtaacccggacggtagcgtcggcaccaaaaacctgcttggcatcacc
accagcgtacactgcgtcgccggcgtggtggattatgtcgtcacgctgatcgagcgcgac
ctgctgccccgttaccccaacgtggatggcgtggtggcgctgaaccatctgtacggctgc
ggcgtggcgatcaatgccccggccgcggtagtgccgattcgcaccatccataacctggcg
ctgaacccgaatttcggcggcgaggtgctggtggtcgggctgggttgcgaaaaactccag
ccggaacgtctgctgcagggcaccccggatgtgcaggccatctcactggacgacaccagt
attgtgcggctgcaggatgagcaccatgtcggtttcaaatcgatggtggacgatatcctg
accatggcggataagcatctgcagcagctcaaccgtcgtaaacgcgaaccggtgccggcg
tccgaactggtggtcggcatgcagtgcggcggcagcgacgccttttccggcgtgaccgcc
aacccggcggtgggattcgcctccgatctgttggtgcgctgcggcgccacggtgatgttt
tccgaagtcaccgaagttcgcgacgccatccatctgctcacgccacgcgccatcaatgaa
gaggtgggtaaacgcctgctggaagagatggcctggtatgacgattatctggacagcggc
aagaccgaccgcagcgccaacccgtcgcccggcaacaagaaaggcggcctggccaacgtg
gtggaaaaagcgctggggtcaatcgctaaatccggcaccagcgcgattgtcgaagtgctg
tcgccgggccagcgcccgaccagacgcggcctgatttacgcggccacgccagccagcgac
tttgtgtgcggcacgcagcagctggcttccggcatcacggtgcaggtattcaccaccgga
cgcggtacgccttacgggctgaaagccgtaccggttatcaagatggcgacccgcacggcg
ctggcggaacgctggcatgacctgatggatatcaacgccggcaccatcgctaccggcgaa
gccaccattgaggatgtgggctggcagttattccattttattctggatatcgccagcggc
aggaaaaaaacctggtcagatcaatggggtctgcacaacgccctgtcggtgttcaacccg
gcgccggtcacctga
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