Dickeya solani IPO 2222: A4U42_10145
Help
Entry
A4U42_10145 CDS
T04410
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00071
Fatty acid degradation
dso00280
Valine, leucine and isoleucine degradation
dso00310
Lysine degradation
dso00362
Benzoate degradation
dso00380
Tryptophan metabolism
dso00410
beta-Alanine metabolism
dso00640
Propanoate metabolism
dso00650
Butanoate metabolism
dso00907
Pinene, camphor and geraniol degradation
dso00930
Caprolactam degradation
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01200
Carbon metabolism
dso01212
Fatty acid metabolism
Module
dso_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A4U42_10145 (fadB)
00650 Butanoate metabolism
A4U42_10145 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A4U42_10145 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A4U42_10145 (fadB)
00310 Lysine degradation
A4U42_10145 (fadB)
00380 Tryptophan metabolism
A4U42_10145 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A4U42_10145 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A4U42_10145 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A4U42_10145 (fadB)
00930 Caprolactam degradation
A4U42_10145 (fadB)
Enzymes [BR:
dso01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A4U42_10145 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A4U42_10145 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A4U42_10145 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A4U42_10145 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
NAD_Gly3P_dh_N
F420_oxidored
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ANE75673
LinkDB
All DBs
Position
complement(2394868..2397057)
Genome browser
AA seq
729 aa
AA seq
DB search
MIYQGDTLYLNWLEDGIAELVFAAPGSVNKLDTRTVASLGEALHHLKNQPSLRALLLRSD
KPAFIAGADITEFLSLFAAPPETLHQWLTEANAIFSQLEDLPVPTLSAINGYALGGGCEC
ALATDFRIATPDVRIGLPEVKLGIMPGFGGTVRLPRLLGADGALEIITAGKDLPAGEALK
VGLVDAVLDSDKLLPAALHMLRLAMTDQLDWRDRRRQKQSPLRLNRIEATMSFATANALV
RQAAGRHYPAPMMALKTIEAAAGLHRDAALQVETDNFVALTQTTAAHALVGVFLNEQAVK
SAAKKWAADASPPARVAVLGAGIMGGGIACQSARKGVPVWMKDISEKALTLGMEEAAKLL
NAQLERGKLDAMTMAGVLAHIHPTLNNNGLEQADLIIEAVVENPQVKARVLADVEACVSE
QTLLVSNTSTIPIGQLAASLQRPQNFCGMHFFNPVHRMPLVEVIRGPQTDEKTLARVVAY
ANKIGKTPIVVNDCPGFFVNRVLFPYIAAFNLLMRDGADFRDVDAVMEKQFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMGKTYRDAVDVLVEHQRFGQKSGAGFYRYYPDAKGKP
RREQDEQTDILLDAVCEPKRTFSAQEIIHRLMVPMLNEVARCLEEGIVATPAEADIALLY
GLGFPPFHGGACRYLDTLGSQHYVDIAQSLTSLGPLYAVPDSLLQMAQRQQRYYPAVEPH
ANLSLHQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcgacacgctgtaccttaactggctggaagacggcattgccgaactg
gtttttgccgcgcccggcagcgtcaacaaactggatacccgcaccgtagccagtcttggc
gaggcgctacaccacctgaagaaccaaccgtcactacgcgccctgctgttgcgctcggat
aaaccggccttcatcgccggagcggatatcaccgaattcctgtcgctgtttgccgccccg
ccggaaacgttgcatcaatggctgaccgaagccaacgccattttcagtcaactggaggat
ttgccggtcccgacgctctccgccatcaacggctacgcactgggcgggggatgcgaatgt
gcgctggcgaccgatttccgcattgcgacgcctgacgttcgcatcggtctgccggaagtc
aaactggggatcatgccgggattcggcggcacagtccggctgccgcggctgttgggcgcg
gacggcgcactggagatcatcaccgccggtaaagacttgcccgccggcgaggccctgaaa
gtcgggttggttgacgccgtcctggacagcgacaagctgctgcccgccgccctgcatatg
ctgcgtctggcaatgacggaccaactcgactggcgtgaccgccgccgccagaaacagtcg
ccgctacggcttaaccgtatcgaagccaccatgagtttcgctaccgccaacgcgctggtg
cgacaggcggcgggccgccactaccccgcgccgatgatggcgctcaaaaccatcgaagcc
gccgccgggctgcaccgcgacgccgcgctgcaggtcgaaaccgacaatttcgtcgcgctg
acccaaacgacggcggcgcatgcgctggtcggcgtcttccttaacgagcaggccgtaaaa
agcgccgccaaaaaatgggccgcagacgcctcgccgccggcacgtgttgcggtgctgggt
gccgggatcatgggcggcggcatcgcctgccagtcggcacgcaaaggggtgccggtgtgg
atgaaagacatcagtgaaaaagcgctgacactggggatggaagaagcggccaaactgctt
aacgcacagttggagcgcggcaaactggacgccatgaccatggcgggggtgctggcccac
atccacccgacactgaacaacaacgggcttgagcaggccgacctgattatcgaagcggtg
gtggaaaatccgcaggtaaaagccagggtgctggccgatgtggaagcctgcgtcagcgag
cagacgctgctcgtctccaatacctcgacgattcccatcgggcaattagcggcctcattg
cagcggccgcaaaacttctgcggtatgcactttttcaatccggtgcatcgtatgccgctg
gttgaagtcattcgcggtccccagaccgatgaaaaaacgctggcccgtgtagtggcttac
gccaacaagatcggcaaaactccgatcgtggtgaatgactgcccgggatttttcgtcaac
cgcgtactgttcccctacatcgctgccttcaatctgctgatgcgcgacggtgcggatttc
cgcgatgtggatgccgtaatggaaaaacagtttggttggccgatggggccggcttacctg
ctggatgtggtcggactggataccgcccaccacgctcaggcagtgatgtcggcaggtttt
ccgcaacgcatgggaaaaacctaccgcgacgctgtcgatgtgctggtggagcatcagcgt
ttcggtcagaagagcggcgcgggcttctaccgttactacccggacgccaaaggcaaaccg
cgccgggaacaggatgaacagaccgatatcttgctggatgcggtctgcgaaccgaagcga
accttcagcgcgcaagagattatccatcgcctgatggtgccgatgctcaacgaagtggcg
cgttgtctggaagaaggcatcgtcgctaccccggcggaagccgacatagcgctgctttac
ggtctgggtttcccgccgttccacggcggcgcctgccgctatctggatacactgggcagc
caacactatgtagacatcgcccagtcgctgacgtcgctggggccgctttacgctgtgcca
gacagcctgttgcagatggcgcagcgccagcagcgctattacccggcggttgaacctcac
gccaatctttctcttcaccaaccggcataa
DBGET
integrated database retrieval system
