Dickeya solani IPO 2222: A4U42_20740
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Entry
A4U42_20740 CDS
T04410
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00260
Glycine, serine and threonine metabolism
dso00270
Cysteine and methionine metabolism
dso00450
Selenocompound metabolism
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01230
Biosynthesis of amino acids
Module
dso_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A4U42_20740
00270 Cysteine and methionine metabolism
A4U42_20740
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
A4U42_20740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dso04147
]
A4U42_20740
Enzymes [BR:
dso01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
A4U42_20740
Exosome [BR:
dso04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
A4U42_20740
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ANE77562
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Position
4846041..4847195
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AA seq
384 aa
AA seq
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MSHFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGQHTGYEYSRSGNPTRHALEANIA
ALEGGIQGFAFASGLAASATVLELLDQGSHIVAVDDIYGGTWRLLDRVRKRSAGLSVTYV
DPADLTGLEQAITPLTRMIWVETPTNPLLKLADLRAIAGLAQRHGVISVADNTFASPALQ
RPLDLGFDIVVHSATKYLNGHSDVVAGLAVVGRDNDLAAQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRLARHSDNALTLARWLEQQPQVEQVYYPGLPSHPQHTLAQQQMSAFGGMIS
VRLRGDADYAGEVIKRTRLFTLAESLGGVESLISQPFNMTHASLPLEQRLRLGITPQLLR
LSVGIENVEDLIADLRQALTGQTA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttcgataccctgaccgttcacgccggctacaccccggacagtaccggcgcg
gtgatgccggcgatttacgccacctcgaccttcgcccagccggcgcccggtcaacatacc
ggttatgaatactcgcgtagcggcaatccaacccgccacgcgctggaagccaatatcgcc
gcgctggaaggggggattcagggctttgccttcgcctccgggctggcggccagcgccacg
gtgttggaactgctcgatcagggcagtcatatcgtcgcggtggacgatatctacggcggc
acctggcggctgctggaccgggtgcgcaaacgcagcgccgggctgagcgtcacctacgtc
gaccccgccgacctgaccgggctagaacaggctatcaccccgctcacccgcatgatttgg
gtggaaacgcccaccaacccgctgctgaaactggcggacctgcgcgctatcgccgggctg
gcccagcgccacggcgtgatcagcgtggcggacaacaccttcgcctccccggccttgcag
cgcccgctggatctgggcttcgatatcgtggtgcattcggccaccaaatacctgaacggt
cattccgatgtggttgccgggctggcggtggtcgggcgggataacgacctggcggcgcaa
ctggcgtttttgcagaatgcggtgggcggcgtgctcgacccgttcagcagcttcctgacc
ctgcgcggcattcgcacgctggcgctgcgcctcgcccgtcacagcgataatgcgctgacg
ctggctcgctggctggagcagcagccacaggtggaacaggtttactaccccggcttgccg
tctcacccgcagcatacgctggcgcaacagcaaatgagcgcctttggcggcatgatcagc
gtgcgtctgcgcggcgacgccgactacgccggcgaggtgattaagcgcacccggctattc
acgctggcggaaagcctgggcggggtggaaagcctgatcagccagccattcaacatgacc
cacgcctccttgccgctggaacagcgcctgcgcctcggcatcacgccgcagttgctgcgc
ctgtcggtcggcatcgaaaatgttgaagacctgattgccgatctccggcaagcgttgacc
ggccagaccgcgtaa
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