Dipodomys spectabilis (banner-tailed kangaroo rat): 122103722
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Entry
122103722 CDS
T07891
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
dsp05200
Pathways in cancer
dsp05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122103722 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122103722 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
122103722 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122103722 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122103722 (Tpr)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122103722 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
FAM25
Motif
Other DBs
NCBI-GeneID:
122103722
NCBI-ProteinID:
XP_042530258
LinkDB
All DBs
Position
Unknown
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRNRPRGRPMASRGLDGSRRGSLRRAGAREPSSDASEPVTKASGSWPSPLFVG
TPPLAAVAAARGPADMASVLQQVLERSELNKLPKSVQNKLEKFLSDQQSEIDGLKGRHEK
FKVESEQQYFEIEKRLSQSQERLVNETREHQVLRFEIDKLNTQLKALTEKNKELEIAQDH
NAASQSQFTRTKEELEAEKRDLLRTNERLSQELEYLTEDVKRVTEKLKESNTAKGELQLK
LDELQASDVSVKYREKRLEQEKELLHGQNTWLNTELKTKTDELLALGREKGNEILELKCN
LENKKEEVSRLEEQMNGLKTSNEHLQKHVEELLTKLKEAKEQQVSMEEKFHNELNAHIKL
SNLYKSAADDSEAKSTELTRAVDELHKHLKEAGEANKAIQDHLLEVEESKDQMEKEMLEK
IGKLEKELENANDLLSATKRKGAMLSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVET
QDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEI
QRLQEDTDKANKHSSVLERDNQRMDVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSAD
ISSSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKISELQLKLES
SLTELEQLRESRHHQMQLVDSIVRQRDMYRILLSQTTGVDIPLQASSLDDISIVSTPKRT
TTSQNTSTPAPVPVIESTEAVEAKAALKQLQEIFENYKKEKADSEKVQNEQHEKLQEQVT
DLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQ
DLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGI
LERSETETKQRLSTQIEKLENEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEIS
LHLNTKELLKNAQKEIATSKQQISSMEAQLASQSAQRTGKGQPSDKEDMDDLLSQLRQAE
EQVNDLKERLKTSTSNVEQYRAMVTNLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLE
KKLMEVEKDKQELQDDKRKAIESMEQQLSELKKTLSSVQSEVQEALQRASEALSNEQQAR
RDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASIRQHLEETTQKAESQLV
ECKASWEERERMLKDEVSKCVSRCEDLEKQNSLLHDQIEKLSDKVVASMKEGVQGSLNVS
LSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAE
REKVQVTAKTMAQQEELMKKTETMNVLIETNKMLREEKERLEQDLQQMQAKVRKLELDIL
PLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEVHT
KRIQQLTEELGRLKAEIARSNASLTNNQNLIQSLKEDLNKVKTEKEAIQKDLDSKIIEIQ
EKAKTITQVKKIGRRYKTQYEELKAQQDKVMESSAQSSGDHQDQHVSVQEMQELKDNLSQ
AESKTKSLENQLENLQKTLSEKETEGRNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRHQ
ITEKEEKTRKAIVAAKSKIAHLASIKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQ
YEGRISRLERELREHQERHLEQRDEPQEPTSKVPEQQRQITLKTTQASGERGIASTSDPP
TANIKPTPVVSTPSKVTAAAMPGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVES
QEAMQSEGPVDHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHAQ
IEPVNQELSPNVVEVVQSSPVERPSTSTAVFGTVSATPSSSVPKRTREEEEDSTIEASDQ
VSDDTVEMPLSKKLKTVAPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTP
MEDSEETSQSLQIDLGPLQSDQQTTTTSSQDGQGKGDDVIVIDSDDEDDDEDENDGEHED
YEEDEDDDDDDEDDAGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESLGG
GESNQRAADSQNSGEGNSGTAESSFSQDVAREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVVGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVKLQTTLRLSVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcggtatctagaaaccgcccaagaggacgacccatggcatcccgg
ggcttggacggatcccgccgcgggagtctcaggcgagctggcgctcgtgagccgtcgagc
gacgcctccgagccggtgaccaaggcttcggggtcctggccttcgcctttgttcgtcggt
acgcctccgttggcagctgtcgccgcggcgcgcggccctgcggacatggcgtcggtgttg
cagcaagtcctggagcgttcggagctcaacaagctgcccaagtcggtgcagaataagctg
gagaagttcttgtcggatcagcagtccgagatcgacggcctgaaggggcgacacgagaaa
tttaaagtggagagcgagcaacagtactttgagattgagaagaggttatcacagagtcag
gaaagacttgtgaatgaaacccgggaacaccaagtcttacgatttgagattgataaactc
aatacacaactgaaagccctcactgagaaaaacaaagaacttgaaattgctcaggatcac
aatgctgctagccagagccaatttacaagaacaaaggaagaattagaagctgaaaaaagg
gatttactaagaaccaatgagagactatctcaagaacttgaatatttaacagaggatgtt
aaacgtgtaactgaaaaacttaaagaaagtaatacagcaaagggggagcttcagctgaag
ttggatgagcttcaagcttctgatgtttctgtgaagtatcgagaaaaacgtttggagcaa
gaaaaggaattgctgcatggtcagaatacatggctgaatacagaattgaaaacaaaaacg
gatgagttgctggctcttggaagagaaaaaggaaatgagattctagagcttaaatgtaat
cttgaaaacaaaaaagaggaggtttctagactggaagaacagatgaatggcttaaaaaca
tcaaatgaacatcttcaaaaacatgtagaagaactgttgaccaaattaaaagaggccaaa
gaacaacaagtcagtatggaagaaaaattccacaatgaactgaatgctcacataaaactc
tctaatctgtacaagagtgctgctgatgactctgaggcaaagagcacagaactaacccgg
gcagtagatgagctgcacaagcatttgaaagaagctggagaagctaacaaagcaatacaa
gatcatcttttagaggtagaagaatcaaaagatcaaatggaaaaggaaatgctggagaaa
atagggaaattggaaaaggaattagaaaatgcaaatgacctgctttctgcaacaaaaaga
aaaggagctatgttgtctgaagaggagcttgcagccatgtctcccactgcagcagctgta
gctaagattgtgaaaccaggcatgaaattaactgagctgtataatgcttatgtggaaact
caggatcagttgcttttggagaaactagagaataaaagaattaataaatatctggatgaa
atagttaaagaagttgaagccaaagcacccattttgaaacgtcagcgtgaagagtatgaa
cgtgcacagaaagctgtggcaagtttatctgttaagctggaacaagctatgaaggagatt
cagcgattgcaggaagacactgataaagccaacaaacattcatcagtacttgaaagagac
aatcagagaatggacgtacaaataaaagatctttcacaacagataagagtgcttttaatg
gaacttgaagaagccagaggtaaccacgtaattcgtgatgaggaagtgagctcagctgac
ataagtagttcatctgaagtgatatcacagcatctagtgtcctacagaaacattgaagaa
cttcagcaacaaaatcaacgtctgttatttgctcttagggaacttggggaaacaagagaa
agggaagaacaagaaacaacttcatctaaaatcagtgagctccagctcaaacttgagagc
tccctcactgaactggagcaactccgtgagtcacgacatcatcagatgcagctggttgat
tccatagttcgtcagcgtgatatgtaccgtattttattgtcacaaaccacaggagttgac
ataccattacaagcttcaagcttagatgatatttctattgtgtcaactcccaaacgtaca
actacgtcacagaatacttctacacctgctcctgtgcctgttattgaatcaacagaggct
gtagaagcaaaggctgcccttaaacagttgcaggaaatttttgagaactataaaaaggaa
aaagctgatagtgaaaaagtacaaaatgagcaacacgagaaacttcaggaacaagtcaca
gatttgaggtcacaaaacacgaaaatttctacccaactagattttgcttctaaacgatat
gaaatgctacaagataatgttgaaggatatcgtcgagaaataacatccctacaagaaaga
aatcagaaactcactgcaacaactcaaaagcaagaacagatcatcaatacaatgactcaa
gacttgagaggagcaaatgaaaaattagctgttgcagaagtaagagcagaaaatttgaag
aaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagggagtctttg
ttagctgaacaaagggggcaaaacttgctgctgactaatctgcaaacaattcagggaata
ttagagcgatctgaaacagaaaccaaacaaaggcttagtacccagatagaaaaactggaa
aatgaaatctctcatctaaagaagaagttggaaaatgaggtggaacaaagacacacactt
acaaggaatctagatgttcaacttctagatacaaagagacagctagacacagagataagc
cttcatcttaacacaaaagagctattgaaaaatgctcaaaaagaaattgcaacatctaaa
cagcagatcagtagtatggaagcccaacttgcttctcagtctgcacaaagaactggtaaa
ggtcagccaagtgacaaagaagatatggatgatctactgagtcaactaaggcaggctgaa
gaacaggtaaatgacttaaaggagagactcaaaacaagtaccagtaatgtggaacagtat
cgagcaatggttactaacttagaagaatcactgaacaaagaaaaacaggtaacagaggaa
gtacgtaagaacattgaagtacgcttaaaagaatcagctgaatttcagacacagttggag
aagaagttaatggaagtagaaaaggataaacaagaacttcaagatgacaagaggaaagct
atagagagcatggaacaacagttatctgagttgaagaaaacactttctagtgttcaaagt
gaagtacaggaagctcttcagagagcaagtgaggctctgagtaatgaacaacaagctcga
cgtgactgccaggaacaagctaaaatagctgtagaagcacaaaacaagtatgagagagaa
ttgatgctacatgctgctgatgttgaagctctgcaagctgccaaggaacaagtttcaaaa
atggcatcaatccgtcagcatttggaagaaacaactcagaaagcagaatcacaattagtg
gagtgtaaagcatcttgggaagaaagagagagaatgttaaaggatgaagtttccaaatgt
gtgtctcgctgtgaagatttagagaaacaaaatagcctacttcatgaccagattgaaaaa
ttaagtgacaaggtagttgcctccatgaaggaaggtgtacaaggttcattaaatgtgtca
ctcagtgaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacgacga
gaaaaagaaattgctgaaactcgttttgaggtggctcaggttgagagtctgcgttatcga
caaagggtagaacttttagaaagagagctgcaggaattgcaggatagcctaaatgctgaa
agggagaaggtccaggtaactgcaaaaacaatggctcagcaggaagaattaatgaagaaa
actgaaacaatgaatgtacttatagagaccaataagatgctcagagaagaaaaggagagg
ctagaacaggatctacagcagatgcaagcaaaggtgaggaagctggaattagatatttta
cccttacaagaagcaaatgctgaactgagtgagaaaagtggtatgttgcaggcagagaag
aagttattagaagaggatgtcaagcgttggaaagcacgtaaccagcatctagtaaatcaa
cagaaagatccagatacagaagaatatcggaagcttctttctgaaaaggaagttcatact
aagcgtatccaacagctgactgaagaacttgggcgacttaaagctgaaattgcaagatca
aatgcatctttgactaacaaccagaacttaatacagagtcttaaggaagatttaaataaa
gtaaaaactgaaaaggaagccattcagaaggatttagattccaaaataattgaaatccag
gaaaaggccaaaactatcactcaagtcaagaaaattggacgcagatacaagactcagtat
gaagaactcaaagcacaacaggataaggtcatggagtcttcggctcagtcatctggagac
catcaggaccagcatgtctcagttcaggaaatgcaagagctcaaagataatctcagccaa
gctgaatcaaagacaaaatctctcgagaatcaattagagaatctgcaaaagacattgtct
gaaaaagagacagaaggaagaaatctacaggaacaaactgtgcaacttcaatctgaactt
tcacgactccgtcaggaccttcaagatagaaccacacaggaggaacaactccgacatcag
ataactgaaaaggaagaaaaaactagaaaggctattgtagcagcaaaatcaaaaattgca
catttagctagtataaaagaccagctaaccaaagaaaatgaggagcttaagcaaagaaat
ggagcattagatcagcagaaagatgaacttgatgttcgtatgacggctcttaagtcccaa
tatgaaggtcgaatcagtcgattggaaagagaactcagggagcatcaagagagacactta
gagcagagagatgagcctcaagaacctactagtaaggtcccagaacagcagcgacagatt
acattgaaaactactcaagcttctggtgaaagaggaatagccagcacatcagacccacca
acagccaatatcaagccaactcctgttgtttctactccaagtaaagtgacagctgcagct
atgcctgggaataagtcaacacccagggccagtatccgaccaatggtcacacctgcaaca
gtcaccaatccaacaactaccccaacagcaacggtgatgcccacaacacaagtagaatca
caagaagctatgcagtcagaggggcctgtggaccatgttccagtttttggaagtacaagt
ggatctgttcgttcaactagtcctaatgtccagccttccatttctcagcccattttaact
gttcagcaacaaacacaggcaacagcttttgtgcaacctactcaacagagtcatgctcag
attgagcctgtaaaccaagaactatccccaaacgtagttgaggttgttcagagttcacct
gttgagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcc
tctgtgcccaagcgtacccgtgaagaggaagaagatagcaccatagaagcatcagaccag
gtctctgatgacacagtagaaatgcctctttcaaagaaattgaaaacagttgcacctgta
ggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaagta
tacaaccaggattctcaagattccattggagaaggagtcacccagggagattatacacct
atggaagacagtgaagaaacatctcaatctctacaaatagatcttggaccacttcagtca
gatcagcagacgacaactacttcatctcaggatggacaaggcaaaggagatgatgtcatt
gtaattgacagtgatgatgaagatgatgatgaagatgaaaatgatggtgaacatgaggat
tatgaagaagatgaagatgacgatgatgatgatgaagacgatgcagggatgggagatgaa
ggtgaagacagtaatgaaggaactggtagtgcagatggtaacgatggttatgaagctgat
gatgctgagggcggtgatggcactgaccctggtactgaaacagaagaaagtttgggtgga
ggtgaaagtaatcagagagctgctgattcgcaaaacagtggtgaaggaaattcaggtaca
gcagagtcatctttttctcaggatgttgctagagaacagcagccatcatctgcatctgaa
agacagacccctagagcaccacagtctcctagaagaccaccacacccactcccccctcgc
cttaccattcatgctccacctcaagagctaggaccacctgtgcagagaattcagatgaca
cggaggcagtctgtgggacgtgggcttcagttgactcccggaataggtggtatgcaacag
catttttttgatgatgaagacaggacagttccaagtactccaactcttgtggtgccacac
cgtacagatggatttgctgaagctattcattccccacaggttgttggtgttcctagattc
cggtttgggccaccagaagatatgccacaaacaagttctagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtatgagacacccctcttccttgctcatgaagaa
gagtctggtggccgaagtgttcccaccactcctctgcaagtcgcagccccagtaactgta
tttactgagagtaccacctctgatgcttcagagcacgcctctcagtccgttccaatggtg
acaacatcgactggcactttatccacaacaaatgaaacagcagccggcgatgatggagat
gaagtatttgtggaggcagagtctgaaggtattagttcagaagcaggcctagagattgat
agccagcaggaagaagaacctgttcaggcatctgatgagtcagacctcccttctactagc
caggatcctccttctagctcttctgtagatacaagcagtagtcagccaaagcctttcaga
cgggtaaaacttcagacaacattgagattaagtgtccgtggtcgtcagtttaacagacag
agaggtgtaagccatgcaatgggaggaagaggaggcataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
