Dipodomys spectabilis (banner-tailed kangaroo rat): 122114310
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Entry
122114310 CDS
T07891
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00780
Biotin metabolism
dsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
122114310 (Hlcs)
Enzymes [BR:
dsp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
122114310 (Hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
122114310 (Hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
122114310 (Hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
122114310 (Hlcs)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_N
Exc
Motif
Other DBs
NCBI-GeneID:
122114310
NCBI-ProteinID:
XP_042543306
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MLITLCYLYLWARWGRAPAALVPGTVRRLRARCSFTFCAAAAQPGGARVCLRRGGRVFCV
GESQSIDDLNKWALFLVSPFRLETEHIAFVTESIWAQGDNFQRPLSSETIVKWSDYCLPL
ACRPGDPYQFIAEASVDNFSKLGVAFMEDRLQMDNGLIPQKIVSVHLRDSTLKELKDQAA
RGQVQSLKLAARPSPEPKPVQDTVEHADRDEPRAPGQDSCKQRTDGEGEPGEHSHLHLFS
CHECLELENSTIESVKFASAENIPDLPYDHSSGLEAVTDELCPKREESRVNMVGKAPNIL
VYVGPGTQDVLGRLEQVRSVLADCVDVDSYTIYHLPEDSGLRDPWADNCILLVIAALEPI
PKDLYQKFMAYLSQGGKVLALSSSFTFGGFQVTGEGTLRKTVQDLVFCKADRSEVRLSVL
SSGRFYKAGPREQLSPAGLHGHLDTEDKHRTILQVPFGSCGGEAVLCQVHLELPPSSPTV
QTQEDFNLLKSSNMKRYEVLREILTTLGISCDVRQVPALTPVSLLLATEEIRDSLMQWLG
AHVDPEGVIKSSKLSLKFVSSCASEVEVTPSSIPVITDTEDFSSEHFNLDIYRQNLQTKQ
LGKVILFAEVTPTTMNLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSPVGCALSTL
LISIPLRSQLGQRIPFVQHLMSLAVVEAVRSMPKYQDINLRLKWPNDIYYSDLMKIGGVL
VNSTLLGETFYILIGFGFNVTNSNPTICINDLITEHNKQHKTALKPFRADCLIARAVTML
EKLVHTFQDEGPQSVLPLYYKYWLHSGQQVRLGSTEGPQVSIVGLDDSGFLQVHQEDGRI
MTVHPDGNSFDMLRNLIVPKQR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacctgtacctgtgggcgcgctgggggcgcgcgcccgcggcc
ctcgtgcccggcacggtgcggcgactgcgcgcgcgctgctccttcactttctgcgccgcg
gccgcgcagcccgggggcgcgcgcgtgtgcctgcgccgcggcggccgcgtcttctgcgtc
ggggagagccagtccatcgacgacttgaacaaatgggccctgtttctcgtctctcccttt
agacttgaaacagaacacatagcatttgtgacagagagcatttgggctcagggtgacaat
ttccagaggccattgtcttcagaaacaattgtcaagtggtctgactactgtttgccatta
gcttgccgacctggggatccctaccagttcattgctgaagcaagcgtggacaattttagc
aagctgggagtggcgttcatggaagatagactccagatggataatggactgataccccaa
aagattgtctcggtacacttgcgggactccactctgaaggaactcaaggaccaggctgca
agagggcaagtgcaaagcctcaagctggccgccaggccttccccagagcccaagcctgtg
caggatactgtggagcatgccgacagagatgagcccagggctcctggccaagactcttgc
aagcagcgtacagatggggagggagagccgggggagcattcccacctccacctattcagt
tgccacgagtgtttggaactggagaacagcaccatcgagtcagtaaagtttgcctctgca
gagaacattccagatcttccctatgaccacagcagcggtttggaggctgtcactgatgag
ctctgccccaaaagagaagaaagcagagttaacatggtggggaaggcacccaacatccta
gtctatgtgggtcctggcactcaagacgtattgggccggctggagcaggtccgttctgtt
ctagctgactgtgtggacgtggacagctacaccatctaccacctgcccgaggacagtggg
ctcagggacccatgggccgacaactgtatattgttggtcattgctgccttggagcccatt
cccaaagacctgtaccagaaattcatggcctatctttctcagggagggaaggtgctggct
ctgtcatcttcattcacctttggtggctttcaggtgacaggggagggcacgctgcggaag
acagtccaggacttggttttctgcaaggctgaccggagtgaggtgaggctcagcgtcctg
agcagtggccgcttctacaaggcaggccccagagagcaactcagccctgctgggctccac
ggtcacctggacactgaggacaagcatagaaccatcctgcaagtgccttttggaagctgt
ggaggagaggctgttctttgccaggtccatctagaactacctcccagctctcccacagta
caaactcaagaagactttaacttgctcaaatcaagcaatatgaaaagatatgaagttctt
cgggagatcctgaccacccttggcataagctgtgatgttcgacaagttcctgccttgaca
cctgtgtccttgctgttggccacagaggaaatccgggattcccttatgcagtggctgggg
gcacatgtggatccggaaggagtaatcaagtccagcaagctctcccttaagtttgtgtcc
tcttgtgcatcagaagtagaagtcactccatcttccatacctgtgattactgacacagaa
gacttctcttccgaacactttaacttagacatctatcgacaaaatctgcagaccaagcaa
ctcggaaaagtaattctgtttgctgaagtgacccccaccaccatgaatcttctggatggg
ttgatgtttgagatgccccaggaaatgggtttaatcgccattgcagtccggcagacccag
ggcaaaggacggggaccgaacgcctggctcagtccagtaggatgtgccctttctactctg
ctgatctccatcccgctgaggtcccagctggggcagaggattccttttgtccagcacctg
atgtctctggctgtggtggaggcagtgcggtccatgcccaagtatcaggatatcaactta
cgattaaagtggcccaacgatatttattacagtgacctcatgaagattggtggagttctg
gttaactcaacactcctaggagaaacattttatatacttattggctttggatttaacgtg
accaacagtaaccctaccatctgcatcaacgaccttatcacagaacacaacaaacaacat
aagacagcactgaagcccttcagagctgactgtctcatcgctcgggctgtgactatgctg
gagaaactggtccacacgtttcaggatgaaggaccccagagtgttcttcccctctattat
aagtactggttgcacagtggtcagcaagtccggctggggagcaccgaggggccacaggta
tccatcgtgggcctcgatgattccgggttcctacaggttcatcaggaagacggcaggatc
atgacagtgcacccagatggcaactccttcgacatgctgagaaacctcattgtgcccaag
cagcggtag
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