Dipodomys spectabilis (banner-tailed kangaroo rat): 122114528
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Entry
122114528 CDS
T07891
Symbol
Lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsp03016
]
122114528 (Lcmt2)
Enzymes [BR:
dsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
122114528 (Lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
122114528 (Lcmt2)
Transfer RNA biogenesis [BR:
dsp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122114528 (Lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Kelch_4
Kelch_5
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
122114528
NCBI-ProteinID:
XP_042543683
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MGPRNRERRTGAVQSTNDSSALSKSSLAARGYVEDAFAGLLVPGAARRAPLIHRGYYVRA
RAVRHCVRAFLSRACALPAAPPAQILSLGAGSDSLYFRLKSAGLLARASVWEVDFPEVAR
RKAERIGDTPALCAFTGPFRTGDPSSALCLEGTDYRILGLDLRQLQRLQGALAAAGLDPA
SPTLLLAEAVLTYLEPDRAADLIAWAAQRFPRALFVVYEQMEPRDAFGQVMLQHFRRLNS
PLHGLDRFPDVEAQRRRFLQAGWTACSAVDMNEFYRRFLPAEERRRVEKLEPFDEFEEWH
LKCSHYFVLAASTGDTPPQTLVFPPSGAFSRVDPASPAGVFPARVVTSDSQGSRLKRYGH
ASVLVSPGVILSAGGFGEQDGRHCRVSKFHLLSRHCGFDWKDSQVCSGGTEARWDGRLYH
TMTHLSDTQILVLGGRLSPVNPALGVLQLHLCGREGHNPEDLKVAVTKVDLEGDSILSRW
RHSTTEVSYQNQEYLFVYGGRGVVEPVLSDWHFLHERTMSWVWISVEGEVPEGRHSHSAC
SWQGGALIAGGLGASEEPLNSVLFLKPVSAGFLWESLDIQPPITPRYSHTAHVLNGKLLL
VGGVWIHSSSVPGVTVIDLTTGLSSEYQIDTTCVPWPLMLHNHTSILLSEEQQLLLLGGG
GNCFSFGTYFNPHIVTLDLSSLSAGG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgcaatcgcgagcgtcgaacgggagctgtgcagagcaccaacgacagcagc
gccctgagcaagagctccctggccgcgcgcgggtacgtggaggacgccttcgccgggctg
ctggttccgggcgccgcgcgccgcgcgccgctcatccaccggggctactacgtgcgcgcg
cgcgccgtgcgccactgcgtgcgcgccttcctgagccgtgcgtgcgcgctccccgccgcg
cctcccgctcagatcctgtccctgggcgccggctccgactcgctgtacttccgcctcaag
tcggcgggcctgctggcccgggcttccgtgtgggaggtggatttcccggaggtggcgcgg
cgcaaggcggagaggatcggtgacacgccggctctgtgcgcgttcaccgggcccttccgg
accggggacccgtcgtccgcgctgtgcttggagggcacggactaccgcatcctgggcctg
gacctgcggcagctccagcggttgcagggggccctggcggccgcgggcctggaccccgcc
tcgcccactctgctcctggccgaggcggtgctgacctacctggagccggatcgcgccgcg
gacctcatcgcctgggccgcccagcgtttcccgcgcgctcttttcgtggtctacgagcaa
atggagccccgggacgccttcgggcaggtcatgctgcagcatttccggcggctgaactcc
ccgctgcacggcctggaccgctttcccgacgtggaggcccagcgccgccgcttccttcaa
gccggctggacggcctgcagtgccgtggacatgaatgaattctatcgccgctttctccct
gcggaagaacgccggcgggtggaaaagctcgagcccttcgatgagttcgaagagtggcat
ctgaaatgctcccactatttcgtcttggcagcttccacgggagacaccccgccccaaact
ctggtgtttcccccgtcaggggcgttttcacgagtcgatcctgcttcaccggccggggtc
ttccccgccagagtcgtcactagtgacagccagggctcacgccttaagcgatacggccat
gcctccgtcctggtgagccccggcgttattctcagcgcgggagggtttggagaacaggat
ggtcggcactgccgagtgagcaagttccacttgctctccagacactgtggctttgattgg
aaagacagccaagtatgcagtggtgggaccgaagcccggtgggatggacgcctttatcac
accatgacacatctttctgatacccagattctggttctgggagggagactgtctcccgta
aatccagccttgggggttctccagcttcatctatgcggaagggagggccataaccccgag
gacctgaaggtggcagtaacaaaggtcgacttggaaggagattcaatcttatcacgttgg
aggcactcaacaacagaagtatcctatcagaatcaggaatatttgtttgtgtatggggga
cggggtgtggtggaacccgtactgagtgactggcatttcctccacgaaaggacaatgagt
tgggtctggatctcggtggagggggaagtacctgaaggtcggcattcccacagtgcctgc
agttggcaggggggagcccttattgctggaggtcttggggcttctgaggagccgttgaac
tctgtactctttctgaagccagtctctgctggattcctctgggaatcactagatatccag
cctcccattactccaaggtattcccacaccgctcatgtactcaatggaaagcttctactg
gttggaggagtctggattcactcttcctcagttcctggcgtgactgttatagatttgact
acaggactgagctctgagtatcagattgacacaacatgcgtgccatggccattaatgtta
cacaaccataccagcatcctcctttctgaagagcaacagctcctcctccttggaggtggt
ggaaactgcttttcctttggcacttatttcaacccccatatagtgacattagacctttct
tccttaagtgctggggggtaa
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