Dipodomys spectabilis (banner-tailed kangaroo rat): 122123782
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Entry
122123782 CDS
T07891
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04010
MAPK signaling pathway
dsp04020
Calcium signaling pathway
dsp04713
Circadian entrainment
dsp04925
Aldosterone synthesis and secretion
dsp04927
Cortisol synthesis and secretion
dsp04929
GnRH secretion
dsp04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122123782 (Cacna1h)
04020 Calcium signaling pathway
122123782 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122123782 (Cacna1h)
04925 Aldosterone synthesis and secretion
122123782 (Cacna1h)
04927 Cortisol synthesis and secretion
122123782 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
122123782 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
122123782 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dsp04040
]
122123782 (Cacna1h)
Ion channels [BR:
dsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122123782 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122123782
NCBI-ProteinID:
XP_042554185
LinkDB
All DBs
Position
Unknown
AA seq
1967 aa
AA seq
DB search
MTEGAPPAGEVRLALGAAAPAGPGAQRGAAAGASPPESPAAERGAEPGADEERPAPYPAL
AATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFRPCEDVECRSERCHI
LEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDAWNRLDFFIVMAGMMEYSLDGHNVSL
SAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGL
LRNRCFLDSAFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQKCSHIPGRRELRVQC
TLGWEAYGQPQAEAGAAARNACINWNQYYNVCRSGDVNPHNGAINFDNIGYAWIAIFQVI
TLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMRE
QRARYLSNDSTLASFSEPGSCYEELLKYVGHVFRKVKRRSLRLYARWRSRGHEKPDPGSG
PGPGPRPPRARRRTASVHHLVYHHHHHHHHHYHFSHGDPRRPSPEPGTGDNRLVPAGAPP
SPPSPGHGPPDSESVHSIYHADCHVEGPQERARAAQAAATAAAGLRLASGLGAMNYPTIL
PSGTIGGGGKDSMGAGPRGEQAAGRSPLSPYEKIQHVVGEHGLGQAPSHLSGLSVPCPLP
SPQAGTLTCQLKSCPYCARALEDPELELSGSESGDSDTHGVYEFTRDLRHGDHRDPMRPP
ADTAAPGSPPRLPQRQASSGRPGSLGRAWASFSGKLGRIVDSKYFNRGIMVAILINTLSM
GVEYHEQPDELTNALEISNIVFTSMFALEMLLKLLACGPLGYIRNPYNIFDGIIVVISVW
EIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFIFS
ILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSW
AALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTDEDKTSAHFEEDLDKFRDLRA
TEMKTYSLAVTPNGHLEGRGSLPPPLIMHTAATPMPTPKSSPHLDAAHGLVDSRRGSSSS
MDPQLGDQKSLASHRSSPCTPWGPGSAWSSRRSSWNSLGRAPSLKRRSQSGERESLLSGE
GKGSTDDEAEGGRPGPGRPGSPRGSPPRRAASLDRRSTPDLRPPRPAALLPARFQDCNGQ
TVALPSEFFLRIDSHKEDASEFDDDVEDSCCFRLHKVLEPYTPQWCRSHETWALYLFSPH
NRLRVSCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPGSTERAFLSVSNYIFTAIFV
TEMMVKVVAQGLLWGDHAYLQSSWNVLDGLLVLVSLVDIVVAMASAGGAKILGILRVLRL
LRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCE
GADTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGVD
QQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRR
LARRRRKAQRRPYYADYCHTRRSVHALCTSHYLDLFITFVISLNVISMSMEHYNQPKSLD
EALKYCNYVFTIVFVFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIVLEEIEMNAA
LPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAAL
GVELFGRLECSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECSREDR
HCLSYLPALSPVYFVTFVLVAQFVLVNVVVAVLMKHLEENNKEAREAAEADAEAEAELEL
ATAQGPLPAPPPPAQVRPGAAAGGSEGAVGDADSLLLPPQDGPDSGPGASGPAVRKVSVS
RMLSLPNDSYMFRPVVPATAPHAHPLPEVEVEAASGPIHPVLPSQER
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgcgccgcccgccggcgaggtccggctggccctgggcgcggcggccccg
gccgggcccggggcgcagcgcggggcggcggcgggcgcgtcgcctcccgagagccccgcg
gccgagcgcggcgcggagcccggcgccgacgaggagcggccggccccgtacccggcgctg
gcggccaccgtcttcttctgcctggggcagaccacgcggccccgcagctggtgcctgcgc
ctggtgtgcaacccgtggttcgagcacgtcagcatgctggtgatcatgctcaactgtgtg
accctcggcatgttccggccctgtgaggacgtggaatgccgctcggagcgctgtcacatc
ctggaggccttcgatgacttcatctttgccttcttcgcggtggaaatggtcatcaagatg
gtggccctggggctgtttgggcagaagtgctacctgggtgacgcttggaacaggctggac
ttcttcattgtcatggcgggcatgatggagtactcgctggacggacacaacgtgagcctc
tcggccatccgcacggtgcgcgtgctgcggcccctgcgtgccatcaaccgtgtgcccagc
atgcggatcctggtcaccctgctgctggacacactgcccatgctgggcaacgttctgctg
ctctgcttcttcgtcttcttcatctttggcatcgtgggcgtgcagctctgggccggcctc
ctgcgcaaccgctgcttcctggacagcgcctttgtcaggaacaacaacctgacgttcctg
cggccgtattaccagacggaggagggggaggagaacccgttcatctgctcctcacgccgg
gacaacgggatgcagaagtgctcgcacatccctggccgccgcgagctgcgcgtgcagtgc
acgctgggctgggaggcgtacgggcagccgcaggccgaggccggggccgccgcccgcaac
gcctgcatcaactggaaccagtactacaacgtgtgccgctcgggggacgtcaacccccac
aacggcgccatcaacttcgacaacatcggctacgcctggatcgccatattccaggtgatc
acgctggagggctgggtggacatcatgtactacgtcatggacgcccactccttctacaac
ttcatctacttcatcctgctcatcatcgtgggctccttcttcatgatcaacctgtgcctg
gtggtaatcgccacgcagttctcggagacgaagcagcgggagaaccagctgatgcgggag
cagcgcgcccgctacctgtccaacgacagcacgctggccagcttctcggagccgggcagc
tgctacgaggagctgctcaagtacgtgggccacgtcttccgcaaggtgaagcgccgcagc
ttgcgcctctacgcgcgctggcggagccgcggccacgagaagccggaccccggcagcggc
ccgggccccggcccgcggcccccgcgcgcccgcaggcgcaccgcctcggtccaccacctg
gtctaccaccaccaccaccaccaccaccaccactaccacttcagccacggcgacccacgc
cggcccagcccggagcccggcaccggagacaacaggctggtcccggcgggtgcaccgccc
tcccccccgtcccccggccacgggccgcccgactctgagtccgtgcacagcatctaccac
gccgactgccacgtggaggggccccaggagagggcacgggcggcacaagccgcagccacg
gcggccgccggcctcaggctggcctcaggactgggcgccatgaactaccccaccatcctg
ccatcagggaccatcggcggtggcggcaaagacagcatgggcgccggccccaggggggag
caggctgcgggacgcagccccctgagcccctacgagaagatccagcacgtggtcggggaa
cacggcctgggccaggcccccagccacctgtccggcctgagcgtgccctgccccctgccc
agcccccaggcgggcacgctgacctgccagctgaagagctgcccctactgtgcccgtgcc
ctggaggacccggagctggagctgagcggctcggagagcggggactccgacacccacggt
gtctacgagttcacccgggacctgaggcacggcgaccaccgggaccccatgcggcccccg
gcagacacagccgccccaggcagccccccacggctgcctcagcggcaggcaagctcgggc
cggcccgggagcctgggccgcgcgtgggcctccttcagcggcaagctgggccgcatcgtg
gacagcaagtacttcaaccgcggcatcatggtggccatcctcattaacacgctgagcatg
ggcgtcgagtaccacgagcagcctgatgagctcaccaatgccctggagatcagcaacatc
gtcttcaccagcatgtttgccctggagatgctgctgaagctgctggcgtgcggcccgctg
ggttacatccggaacccctacaacatcttcgacggcatcatcgtggtcatcagcgtgtgg
gagatcgtggggcaggcggacggcgggctgtcggtgctgcgcactttccggctcctgcgg
gtgctgaagctggtgcgcttcctgcctgcgctgcggcgccagcttgtggtgctcatgaag
accatggacaacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagc
atcctgggcatgcacctctttggctgcaaattcagcctgaagacagacacgggagacacc
gtccccgacaggaagaactttgactctttgctgtgggccatcgtcactgtgttccagatc
ctgacgcaggaggattggaacgtggtgctctacaacggcatggcctccacctcgtcctgg
gccgccctctacttcgtggcgctcatgaccttcggcaactatgtgctcttcaacctgctg
gtggccatcctggtggaggggttccaggcagagggggacgccaccagatccgacaccgat
gaagacaagacatctgctcactttgaggaagacttggacaagttcagagacctgcgggcc
acagagatgaagacatactcgctggcagtgacccccaatgggcacctggaaggccggggc
agcctgcccccacccctcatcatgcacacggccgccacgcccatgcccactcctaagagc
tccccacacctggacgcggcccacggccttgtggactcacggcgtggcagcagcagctcc
atggaccctcagctcggggaccagaagtctctggccagccaccgcagctccccctgcacc
ccctggggccccggcagcgcctggagcagccggcgctcgagctggaacagcctgggccgt
gcgcccagcctcaagcgccgcagccagagcggggagcgcgagtccctgctgtcgggagag
ggcaaaggcagcaccgacgacgaggcggagggcggcaggccggggcccggccgcccaggc
tccccgcgcggctccccgccgcgccgggccgcctccctggaccgccgcagcacgccggac
ctgaggcccccccggccagccgccctcctgcccgccagattccaggactgcaacgggcag
acggtggcccttcccagcgagttcttcctgcgcatcgacagccacaaggaggacgcctcg
gagttcgatgacgacgtggaagacagctgctgcttccgcctgcacaaggtgctggagccc
tacaccccccagtggtgccgtagccacgagacctgggccctgtacctcttctccccacat
aacaggctgcgcgtctcctgccagaaggtcatcgcgcacaagatgtttgaccacgtggtc
ctcgtcttcatcttcctcaactgcatcaccatcgccctggagaggccggacatcgacccc
ggcagcaccgaacgggccttcctcagcgtctccaactacatcttcacagccatctttgtg
acagaaatgatggtgaaggtggtggcccagggcctgctgtggggtgatcacgcctacctg
cagagcagctggaatgtgctggacgggctgctggttctggtgtccctggtagacatcgtc
gtggccatggcctcggccggtggcgcgaagatcctgggcatcctgcgcgtgctgcgtctg
cttcggaccctgcgccctctgagggtcatcagccgggccccgggcctcaagctggtggtg
gaaacgctgatctcgtcgctcaggcccatcggcaacatcgtgctcatctgctgtgccttc
ttcatcatcttcggcattctgggcgtgcagctcttcaagggcaagttctactactgcgag
ggtgcggacaccagaaacatctccaccaaggccgagtgccgggctgcgcactaccgctgg
gtgcggcgcaagtacaacttcgacaacctgggccaggcgctgatgtcccttttcgtgctg
tcctccaaggacggctgggtgaacatcatgtacgacgggctggacgccgttggcgtcgac
cagcagcccgtacagaaccacaacccctggatgctgctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttccacaag
tgccggcagcaccaggaggcggaggaggcgcgccggagggaggagaagcgtctgcggcgc
ctggcgcggcggcgcaggaaggcccagcgccggccctactacgccgactactgccacaca
cgccgctccgtccacgcgctgtgcaccagccactacctggacctgttcatcaccttcgtc
atcagcctcaacgtcatctccatgtccatggagcactacaaccagcccaagtccctggac
gaggcgctcaagtactgcaactacgtgttcaccatcgtcttcgtcttcgaggccgcgctg
aagctggtggccttcggcttccggcggttcttcaaggacaggtggaaccagctggacctg
gccatcgtcctgctgtctatcatgggcatcgtgctggaggagatcgagatgaacgccgcg
ttgcccatcaaccccaccatcatccgcatcatgcgcgtgctgcgcattgcccgtgtcctg
aagctgcttaagatggccacgggcatgcgggccctgctggacacggtggttcaagccctt
ccccaggtagggaaccttggccttctttttatgctcctgttttttatctatgctgcgctg
ggagtggagctgttcgggaggctggagtgcagcgaggacaacccctgcgagggcctgagc
aggcacgccaccttcaccaacttcggcatggccttcctcacgctgttccgcgtgtccacg
ggggacaactggaacgggatcatgaaggacacgctgcgggagtgctcccgggaggacagg
cactgtctcagctacctgccggcgctgtctcccgtctactttgtcaccttcgtgctggtg
gcgcagttcgtgctggtcaacgtggtggtggccgtgctcatgaaacacctggaggagaac
aacaaggaggcccgggaggcggcggaggccgacgcggaggccgaggccgagctggagctg
gccacggcgcaggggcccctgcccgcgcccccaccgccagcgcaggtcaggccgggagcg
gctgcagggggttccgagggtgccgtgggcgacgcggacagcctcctcctcccgccacag
gacggcccagactccgggccaggcgcctcgggtccagccgtgcgcaaggtgtcggtgtcc
agaatgctctcgctgcccaacgacagctacatgttccggcccgtggtgcccgccacagcc
ccccacgcgcacccgctgccggaggtggaggtggaggccgcttccggtcccatccacccc
gtcctccccagccaggagcggtga
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