Dipodomys spectabilis (banner-tailed kangaroo rat): 122127945
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Entry
122127945 CDS
T07891
Symbol
Tubb3
Name
(RefSeq) tubulin beta-3 chain
KO
K07375
tubulin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04145
Phagosome
dsp04540
Gap junction
dsp04814
Motor proteins
dsp05010
Alzheimer disease
dsp05012
Parkinson disease
dsp05014
Amyotrophic lateral sclerosis
dsp05016
Huntington disease
dsp05020
Prion disease
dsp05022
Pathways of neurodegeneration - multiple diseases
dsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122127945 (Tubb3)
09144 Cellular community - eukaryotes
04540 Gap junction
122127945 (Tubb3)
09142 Cell motility
04814 Motor proteins
122127945 (Tubb3)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122127945 (Tubb3)
09164 Neurodegenerative disease
05010 Alzheimer disease
122127945 (Tubb3)
05012 Parkinson disease
122127945 (Tubb3)
05014 Amyotrophic lateral sclerosis
122127945 (Tubb3)
05016 Huntington disease
122127945 (Tubb3)
05020 Prion disease
122127945 (Tubb3)
05022 Pathways of neurodegeneration - multiple diseases
122127945 (Tubb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122127945 (Tubb3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dsp04812
]
122127945 (Tubb3)
04147 Exosome [BR:
dsp04147
]
122127945 (Tubb3)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122127945 (Tubb3)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122127945 (Tubb3)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122127945 (Tubb3)
Exosomal proteins of colorectal cancer cells
122127945 (Tubb3)
Exosomal proteins of bladder cancer cells
122127945 (Tubb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7tm_4
7TM_GPCR_Srsx
Misat_Tub_SegII
7TM_GPCR_Srx
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
122127945
NCBI-ProteinID:
XP_042558195
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MPAGTGTGFGPSDPPVRTVPTQGLNSIPTATPYLALSANQTGPWCLLVPIPDGLFFSLGL
VSLVENVLVVISIAKNRNLHSPMYLFICCLALSDLLVSVSIVLETTVILGLEAGALATRE
MVVQWLDNVVDVLICGSMLSSLCFLGAIAIDRYISIFYALRYHSIVTLSRARWVIVAIWG
ASIFSSTLFMAYYNHMAVLLCLATFFLATLALMAILYLHMLSRACHHARAIAQLHKRQKH
PVHQGFWLKGAATLAILLGIFFLCWVPFFLYLTLITLCPRHPTCSCFFKNLNLFLALIIF
NSIVDPLIYAFQSQELRMTIKEVLRCTWASAGRTRELFLEGSDRVPVLVRSRYGRHETGR
HDGRVPATPTARPTPAFPAFPAPARARPASLRPHRPPAAASMREIVHIQAGQCGNQIGAK
FWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSG
AFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSL
GGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDET
YCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVP
FPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRG
RMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFK
RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYED
DDEESEAQGPK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgccggctggaactggaaccggcttcggcccttccgaccccccggtcaggactgtgccc
acacagggactgaactccatcccgacagccactccttacctggcgctgtctgccaaccag
acgggaccctggtgcctgctggtgcccatcccggatggcctctttttcagcctggggctg
gtgagcttggtggagaacgtgctggtggtgatttctattgccaagaaccgaaacctgcat
tcacctatgtacttgttcatctgctgcctggctttatctgatctgctcgtgagtgtaagc
attgtgctggagaccactgtcatcttggggctagaggcaggggccctggccacccgggag
atggtggtacagtggctggacaatgtcgttgacgtactcatctgtggctccatgctgtca
agcctctgcttcctaggagccatcgcgatagaccgatacatctccatcttctatgcactg
cgctatcatagcattgtgacactgtcccgggcacggtgggtcattgtggccatctgggga
gccagcatcttttccagcactctcttcatggcttactacaatcacatggctgtcctgctt
tgtcttgctaccttttttctagccacactggccctcatggccattctgtaccttcacatg
ctctcacgggcatgccaccatgcccgggccattgctcagctccacaagagacagaagcat
cctgttcaccagggcttctggctcaaaggtgctgccacccttgctattctcctgggcatt
ttcttcttatgctgggtccccttcttcctgtacctcacactcatcaccctctgccccagg
caccctacctgcagctgcttcttcaagaacctcaacctcttccttgccctcatcatcttc
aactccattgttgaccccctcatctatgccttccagagtcaggagctccgcatgacgatc
aaggaggtgctgcggtgcacctgggcgagcgcgggccgcacgcgggagctcttcctggag
ggctcggaccgcgtccctgtccttgtccgctcccgctacggccgccatgaaaccggccgc
catgacggccgcgtgcccgcgacaccgacggcccgtcccacgccagcgttcccagcgttc
ccggctcccgccagggcccgcccggcatcgctccgtccgcaccgcccgcccgccgcagcc
agcatgagggagatcgtgcacatccaggccggccagtgcggcaaccagatcggggccaag
ttttgggaggtcatcagtgatgagcatggcatagatcccagcggcaactatgtgggtgac
tcagacctgcagctggaacgcatcagtgtctactacaacgaggcctcctctcataaatat
gtgcctcgggctatcctggtggacctggagcctggaactatggatagcgtacggtcaggg
gcctttggacatcttttcaggcctgacaacttcatctttggtcagagtggggctggcaac
aactgggccaagggtcactacacagagggtgcggagctggtggactcagtcctagatgtt
gtgcggaaggagtgtgagaattgcgactgcctgcaaggcttccagctgacccactcccta
ggtgggggcacaggctcgggcatgggcaccctgcttatcagcaaggtgcgggaggagtat
cctgaccgcatcatgaacaccttcagtgtggtgccctcacccaaagtctcagacaccgtg
gtggagccctacaacgccacactgtccatccaccagctggtggagaacacggatgagacc
tactgcattgacaacgaggccctgtacgacatctgcttccgcaccctgaagctggccaca
cccacgtatggggacctcaaccacctggtgtcggccaccatgagtggggtcaccacctcc
ctccgctttcctggccagctcaatgcagacctgcgcaagctggctgtgaacatggtgccc
ttcccccgcctgcacttcttcatgcccggctttgccccactcacagcccggggcagccag
cagtaccgtgccctgacagtgcctgagctcacccagcagatgtttgatgccaagaacatg
atggctgcctgtgacccccgccatggccgctacctgacagtggccactgtcttccgtggg
cgcatgtctatgaaagaagtagatgagcagatgctggctatccagagcaagaacagcagc
tactttgtggagtggatccctaacaatgtcaaggtagctgtgtgtgacatccctcctcga
ggcctcaagatgtcttccaccttcatcggcaacagcacggccatccaggagctgttcaag
cgcatctctgagcagttcaccgccatgttccggcgcaaggccttcctgcactggtacacc
ggtgagggcatggacgagatggagttcacggaggccgagagcaacatgaatgacctggtg
tctgagtaccagcagtaccaggacgccacagccgaggaggagggcgagatgtatgaagat
gatgatgaggagtctgaggcccagggccccaagtga
DBGET
integrated database retrieval system
