Dichomitus squalens: DICSQDRAFT_155881
Help
Entry
DICSQDRAFT_155881 CDS
T03133
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DICSQDRAFT_155881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_155881
Enzymes [BR:
dsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DICSQDRAFT_155881
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
DICSQDRAFT_155881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18837537
NCBI-ProteinID:
XP_007367074
JGI:
155881
UniProt:
R7SWL9
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MAVYGEEEDWGRVAQTHWRGLGLTDPIKSVEDKWLLLPAFLKVKGLVKQHIDSFNYFVDV
DIKNILKANNKVTSDVDPRFWLKYTDIVVGFPDRTDADAIDKSVTPHECRLRDTTYSAPI
LVTIQYTRGKTVVRRANVNIGRLPIMLRSNKCVLTGRNEAQLARMTECPLDPGGYFIVKG
TEKVILVQEQLSKNRIIVEIDPTKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIH
EDVPIAIALKALGIQSDKEILLLTAGNHEAYKSAFSPNLEEAAKLGVFTRHQALEWIGSR
VKVNRRVVGPRRPSWEEALEALATIVLAHVPVHGLDFRPKAVFVATMTRRVLMAMDDEKM
VDDRDYVGNKRLELAGQLLALLFEDLFKTFNANLKAAIDKVLKKPSRTSEFDAFNTMQFQ
GDHITAGFVRAISTGNWSLKRFKMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSG
PRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIIRIAFMLGVEDISLAT
GAEIYGPHTFVVNVNGSIIGLTRYPARFVSNFRRLRRAGRFSEFVSVYINHHHRTVLIAS
DGGRICRPMIIVENGRPKVTSEHIAQLKQGQLTFDDFLRKGLVEYLDVNEENDSYIALYE
KDIVPGTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQLNRIDT
LLYLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALILNKASLDRGYG
RCQVLRKNATLIRKYPNGTFDRLADAPLDENGQVQKKYDIVQTDGLAGVGERVDPGDVYI
NKQTPTNANDNSFTGQAATVPYKNTPMTYKSPVAGQIDKVMVTDTENDQTLIKVLIRQTR
RPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGIVPDTIMNPHGFPSRMTVGKMIELLAG
KAGVLAGKLQYGTAFGGSKVEDMSRILVENGFSYAGKDMLTSGITGEPLEAYVYFGPIYY
QKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLM
ISSDQFQVDACEECGLLGYNGWCPYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLVLD
DA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatatggggaggaagaagattgggggagggttgcgcaaacgcactggagaggc
cttgggctcacggacccaatcaaaagtgtagaggacaaatggcttttgcttccggccttc
ctcaaggtcaaaggactagtaaagcaacatatcgactccttcaactactttgtcgatgtg
gacatcaagaacatattgaaggcgaataacaaggtcacgtcggacgtcgatccccgcttc
tggctgaagtacacggacatcgtggtcggcttccccgacaggacggacgcggacgcgatt
gacaagagcgtcacccctcatgaatgccgactccgcgatactacatacagcgcaccaatc
ttagtgaccatccaatacacgagaggaaagactgtggttcgtcgagcgaacgtgaacatt
ggtcgactgcctatcatgctccgaagcaacaagtgcgtgctcacaggccgcaatgaagca
cagcttgctcgcatgacggagtgtccgctggatcccggaggatacttcatcgtcaaagga
acggagaaggtcatcctcgttcaagagcaactgagcaaaaaccgtattatcgtcgagatt
gacccaacgaagggggttgtacaggcttcatgtacatcatcaacgcatggtggtctgaag
tcaaaaacttacgttgccacaaagaagggcaagatctacctccgccacaactctattcac
gaggacgttccgattgctatcgctctcaaggccctaggcatccagtcggacaaagaaatt
ttactcctcaccgcagggaaccacgaggcgtacaagtctgccttctcgccaaatctcgag
gaagcggcgaaacttggagttttcactcgtcaccaggctctcgagtggataggctctcgg
gtgaaggtcaaccggagggtagtgggtccgaggcgtccctcgtgggaggaggcactggag
gcgctcgcaacgatcgtccttgctcatgtgccagtccatggtctcgacttccgccctaag
gccgtctttgtggcgacgatgacccgtcgcgtcctaatggccatggacgacgaaaagatg
gtggatgaccgagattacgtcggaaacaaacggctcgaactggcggggcagcttctagcg
cttctcttcgaggacctctttaagacgttcaatgccaacttgaaggctgcgatcgacaaa
gtcttgaagaagccgtcacggacgagcgaatttgatgcgttcaacacgatgcagtttcaa
ggggatcacatcactgcgggctttgtgcgcgcgatatccacggggaactggtctctcaaa
cggttcaagatggaccgggcgggcgtgacacacgtcctcagcaggctgtcgttcatctcg
gctctcgggatgatgacccggatatcttcccagtttgagaagacacgcaaggtcagtggc
ccccgagcgctgcaacccagccaatggggcatgttatgtccgagcgacacgccagaagga
gaggcatgtgggctggtcaagaacctcgcgttgatgacgcacatcaccacggacgtggag
gaggagccgatcatcaggatagcgttcatgctgggcgttgaagacatcagtttagcgacc
ggcgcagaaatctatggcccacacacatttgtagtcaatgtgaacggcagcatcatcggc
ctaacacggtatcccgcgcgcttcgtcagtaatttccgaagactacggcgagcaggaaga
ttcagcgaattcgtcagcgtgtacatcaaccatcaccatcggaccgtactcattgcgagc
gacggtggccgtatatgtcgacccatgatcatagtagagaatgggaggccgaaggtcacg
tctgagcatatcgcccaactcaagcaaggccagctgacattcgacgacttccttcggaag
ggtctcgtggaatacctggacgtcaacgaggagaacgactcttacatcgcgctatacgaa
aaagacatcgttcctgggacgacacacttggagatcgaacccttcacgttgctcggagcc
gtcgccggactgattccgtacccacaccacaatcagtcaccccgaaacacgtaccaatgc
gctatgggcaagcaagccattggcgccatcggctacaatcaactcaaccgcatcgacaca
ctgctatatctgtcagtctatccacagcagccgatggtgaagaccaagaccattgagctc
attggctacgaccgcttgccggccgggcagaacgctaccgtggcggtcatgagttactcc
ggatatgatatcgaggatgcgctcatcttgaataaggctagcctcgaccgtggctacggt
cgatgtcaagtcttacgcaagaacgccacccttatccgcaagtaccccaacggaacgttc
gaccgcctcgccgatgcgcccttggacgagaacggccaggtgcagaaaaagtacgacatc
gtccagacggacggtctcgcaggcgttggcgagcgtgtcgatcctggggacgtgtatatc
aacaagcagacaccaacaaatgccaacgacaactcgttcaccggtcaggcagcgacggtc
ccgtataagaacacgcccatgacttacaagtcacctgttgcgggtcagattgataaggtc
atggtcactgacaccgagaacgatcagacgctcatcaaggtgctgatacggcaaacgcga
cggccagagcttggcgacaagttttcgtcgaggcacgggcagaagggcgtatgtggcctg
attgtcaaccaggaggacatgccgttcaacgaccaaggcatcgttcctgacacaatcatg
aacccgcacggttttccgtcccgcatgacggtagggaagatgattgagcttctggctggc
aaggctggtgtgttggcaggcaagttgcagtacggtaccgcgttcggtggctccaaggtc
gaagatatgtcgcgcattttagtggagaacggattcagctatgctggaaaggacatgctc
actagcggcatcaccggcgagcccctagaagcttacgtttactttggacccatttattat
caaaaactgaaacacatggtcatggataagatgcatgctagggcgaggggcccgcgcgca
acgctgacaagacagccgacagaaggtcgatcgcgtgaaggtggtctccgacttggggag
atggagcgcgattgtcttatcggctacggcgcgacgcagctgctcctggaacggctcatg
atatcgtctgaccagttccaggtggacgcgtgtgaggagtgcggcttgcttgggtacaat
gggtggtgcccgtactgcaagtcatcgaagaagatggcgcaattgacgattccatatgct
gcaaagctgctcttccaggagctcatggcgatgaacgttgtcccgcggttagtgctggat
gacgcatga
DBGET
integrated database retrieval system