Dichomitus squalens: DICSQDRAFT_96990
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Entry
DICSQDRAFT_96990 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
dsq03013
Nucleocytoplasmic transport
dsq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_96990
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_96990
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DICSQDRAFT_96990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_96990
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_96990
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_96990
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_96990
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DICSQDRAFT_96990
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
DICSQDRAFT_96990
Pre-60S particles
DICSQDRAFT_96990
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
DICSQDRAFT_96990
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
DICSQDRAFT_96990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
18845270
NCBI-ProteinID:
XP_007360906
JGI:
96990
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MEGILDFSAEFDVSLMDRVVMAFYSGVGQEQQLAQQVLTQFQDSPDAWTRVPDILERSSF
PQTKYIGLQILEKLINTRWKSLPEGQRQGIRNFVVGITVKVASDEATMRREKTYLNKLNL
ALVQILKQEWPHNWPMFIPELVESSKTNLSLCENNMVILKLLSEEIFDYSAEQMTQAKVK
NLKNQMCGEFSEIFKLCSEILEEAQKTSLIRATLETLLRFLNWIPLGYIFETTIIDLLLN
RFLEAPDFRNVTLKCLAEIAALNVGPEYDPKFVILFAMVMTSVNRMIPPSTNIAQAYANA
GDAGQELVLNLALFLSNFLSTHLRAVETEQNRDVLLNAHLYMVKISQVDEREIFKICLEY
WLKLVAELYEEIQSLPIGDSGLLMGLSLGSTNSMLNGQSLRKNIYSDVLSNLRLVVIEKM
VKPEEVLIVENEEGEIVREFMKESDTIVLYKSMRELLVYLTHLDVADTENILTEKLQKQV
DGSEWSWQNLNTLCWAIGSISGAMNEETEKRFLVTVIKDLLGLCEIKRGKDNKAVVASDI
MYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRHFVMQQS
GESEPFVDEILRLLHRITVDLSPQQVHTFYEAVGYMISAQPNKPQQEKLIAKLMELPNNA
WDSLMAQAAQNMDVLSSPDNIKILSNVLKTNVSACTSIGTFYLPQIGRIFLDMLGLYKAV
SGIISETVAREGLIATKTPKVRQLRTIKKEILKLMETFVKKSEDLEIVNSNFMPPLLDAI
LGDYNRNVPAARDAEVLNVMATIIGRLGPLLTPQVPAILDAVFEPTLNMINQDFAEFPEH
RVGFFKLLRAINLHCFPALLTLPPAQFKLFMDSIIWAIKHTMRDIAETGLNLCLEVVNNF
AGADPAVANAFFQQYFLSIMQDIFYVLTDTDHKSGFKLQSLLLARMFQLVETNQISVPLF
DPAAVPDPTISNAVFLREYTANLLKSAFPHVQNSQIQTFVLSLGEFHSDINRFKLALRDF
LVQLKEFSGDNADLYLEEKELEAQRKAQAEREAAMRIPGMLKPSQLEDKDEDI
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggagggcattctcgacttctccgcagagttcgatgtctcgctcatggacagagtggtg
atggctttctattcaggagttggccaggagcaacaactggcccagcaagttttgactcaa
tttcaagatagcccagacgcctggaccagggtacctgatatcctcgaacgctcgtcgttt
ccgcagacgaagtacattggtctgcagattctggagaagttgatcaacacgaggtggaag
tcacttcccgagggtcagcggcaaggcatccggaactttgtcgtcgggatcacggtgaag
gtcgcgtcggatgaggcgacaatgcggagagaaaagacctacttgaacaagttgaacctc
gcgctcgttcagatcctcaagcaggagtggccgcacaattggccaatgttcatcccggag
ctcgtcgagtcctcgaagacgaatctctcgttatgcgagaacaacatggtgatcctcaag
ctcctgtctgaggaaatcttcgactactcggccgagcagatgacgcaggccaaggtcaaa
aacttgaagaaccagatgtgcggcgagttctccgagatcttcaagctctgttcagagatt
ttggaggaggcccagaagacgtccctgatcagggcaaccctggagacgctgcttagattc
cttaactggatccctctgggttacatcttcgagacgactatcattgacctgcttctaaac
cggttcctggaggcacccgacttccggaatgtcaccctcaagtgtttggcggagattgcg
gctctgaatgtaggcccagaatacgatcccaaattcgtcattctgttcgctatggtcatg
acctctgtgaaccgcatgatccctccgagcaccaacatcgcgcaggcgtacgcgaatgct
ggcgacgctggccaggagctcgtcctcaatcttgccctcttcctatccaacttcttgtcc
acgcatctgcgtgcggtcgagactgagcagaaccgcgatgttcttttgaacgcgcatcta
tatatggtcaagatctcgcaggtggacgagcgcgagatcttcaagatttgcttggaatac
tggctgaagctcgtagcggagctctatgaggagatccagagcctgccgatcggcgacagc
gggctgctcatggggctcagcttgggtagcacgaactcgatgctgaacggccagtcgttg
cgcaagaacatctacagcgacgtgctttccaatcttcggctcgtggtgatcgagaagatg
gtcaagcccgaggaggttcttattgtcgagaacgaggaaggcgagatcgttcgagaattc
atgaaggagagcgacactatcgtgctttacaaatcaatgcgcgagcttctcgtgtacttg
acccacctggacgtggcggacaccgaaaacatcttgacagagaagctccagaagcaggtc
gacggctcggagtggtcttggcagaacctaaacacgctctgttgggccatcggttctatc
tccggcgccatgaacgaggagacggagaagcgcttcttggttacagtcatcaaggatctg
ctcggactctgtgagatcaagcgcgggaaagacaacaaggccgtcgtcgcgtccgatatc
atgtacattgttggccagtatccccggttcttgaaggcgcactggaagttcttgaagacc
gtcgtcaacaagttgttcgagttcatgcacgagacgcacgaaggcgtgcaggacatggct
tgtgacacgttcatcaagatcgcgcagaagtgccggcgtcactttgtgatgcaacagtca
ggagagtccgagccctttgtggacgaaattctgcggttgctgcatcgaatcaccgtcgac
ttatcgccgcagcaggtccacacattctacgaggccgttggatacatgatctccgctcag
ccgaacaagcctcagcaggagaagctgattgcgaaactcatggagctgcccaacaatgcg
tgggattccctcatggcccaggcggcgcagaacatggacgtgttgagcagccctgacaac
atcaagatcttgtccaacgtcctgaagaccaacgtttcagcgtgcacgtccatcggcacg
ttctaccttccccaaattgggaggatattcttggacatgcttggtttgtacaaggccgtc
agcggtatcatcagcgagaccgttgcccgagaaggcctcattgcgaccaagacgccgaaa
gttcggcagctccgaacaatcaaaaaggaaatcctcaagttgatggagacgttcgtcaag
aaatcggaggacctcgagatcgtgaacagcaatttcatgccgcccttgctagacgcgatc
ctgggcgactacaaccgcaacgtgcccgcggcacgcgatgcggaggtgctgaacgtcatg
gccacgattatcggccgcctggggcccctgctcacacctcaagtgcctgcgatcctagac
gccgtcttcgagccgacattgaacatgatcaaccaggactttgcggagttcccagagcac
cgtgtcgggttcttcaagctgctgcgtgccattaacttgcactgcttcccagccctgttg
acccttccaccggcgcagttcaagctgttcatggacagcatcatctgggctatcaagcac
acgatgcgggatatagccgagacgggcctgaatctgtgtctggaagtcgtcaacaacttc
gctggcgccgatccggcggtagcgaacgcgttcttccagcagtactttttgagtatcatg
caagacatcttctacgttctgacggatacggatcacaagagcggcttcaaactccaatcg
ctgctgctcgcgcggatgttccagctcgtcgagacgaaccagatttccgtcccgctgttc
gatcccgcagcagtgcctgacccaacgatcagcaacgcggtatttttgcgcgagtacacg
gcgaacctgctcaagtctgcgttcccacatgtccaaaattcgcaaatccagacgttcgtc
ctttctttgggcgagttccacagcgatatcaaccggttcaagcttgcgcttcgcgacttc
ctggtgcagctcaaggagttctctggggataacgcggacctgtacctcgaagaaaaggag
ctggaggcccagcgcaaggcgcaagcggagcgcgaagctgcgatgcgcatcccgggaatg
ctcaagccgtcgcagctcgaggacaaggacgaggatatttga
DBGET
integrated database retrieval system