Drosophila serrata: 110186954
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Entry
110186954 CDS
T06108
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dsr
Drosophila serrata
Pathway
dsr03020
RNA polymerase
dsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110186954
09124 Replication and repair
03420 Nucleotide excision repair
110186954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsr03021
]
110186954
03400 DNA repair and recombination proteins [BR:
dsr03400
]
110186954
Enzymes [BR:
dsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110186954
Transcription machinery [BR:
dsr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110186954
DNA repair and recombination proteins [BR:
dsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110186954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110186954
NCBI-ProteinID:
XP_020811948
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEEEMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGMDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaacgaggaagagatgtacgaggaggagaatgcggaggagatctcccac
gagctgtggcaggaagcctgctggatcgtgatcaatgcttacttcgacgagaagggtttg
gtgcgccagcaactggacagtttcgacgagttcatccagatgtcggtgcagcgcattgtg
gaggactcaccggccatcgagttgcaggccgaggcgcagcatacctccggcgaggtggag
acgccgccgcgcttctccctgaaattcgagcagatctacctctcgaaaccgacccactgg
gagaaggacggctcgcccagtcccatgatgccgaatgaggcgcgtctgcgcaatctcacc
tattctgcgccactctacgtggacataaccaagacaaagaatgtggagggtatggatcct
gtagagacgcagcaccagaagactttcatcggcaagatacccatcatgctgcgttccacc
tattgcctgctgtcccagctcactgatcgtgatttgacggagttgaacgagtgcccgctg
gaccccggcggctacttcatcatcaacggttcggaaaaagtgcttatcgcccaggaaaag
atggccaccaatacggtgtatgtgttcagtatgaaggacggcaagtatgccttcaagacg
gagatccggtcgtgtctggagcacagttcgcgtcccacctccacgctatgggtgaacatg
atggccagaggatcgcagaatattaagaagtcggccattggccaaaggatcattgctatt
ctgccgtatatcaaacaggagatcccaatcatgattgtgttccgcgccttgggctttgtg
gctgatcgcgatattctagagcacatcatctacgacttcgacgatccggagatgatggag
atggtgaagccatctctagatgaggcattcgttgtgcaggagcagaatgttgccctgaat
tttataggagcgcgtggtgctcgtcccggagtcacaaaagacaagcgtatcaagtacgcc
aaggaaattctgcagaaggaaatgctgccccatgtcggcgtatcggatttctgcgagacc
aagaaggcgtacttcctcggctatatggtgcatcgcctgttgctggcctctctgggccgg
agggagctcgatgaccgtgatcactatggtaacaagcgacttgatctcgccggaccgctg
ctagcattcctcttccgcggcttatttaaaaacctgatgaaggaggtgcgcatgtacaca
caaaaattcatcgatcggggcaaggactttaatctggagttggccatcaagacaaacatc
ataacagacggtctgaggtactccctggccacaggcaactggggtgatcagaagaaggcc
catcaggcgagagccggtgtctctcaggtgttgaatcgtctgacctttgcctccactctc
tcccatttgcgtcgcgtcaactcgcccattggccgagacggcaagctggccaagccccgt
cagctgcacaacaccctctggggcatgttgtgtcccgccgagacgcccgagggcgctgct
gtcggcctggtaaagaatttggcacttatggcctatatatcggtggggtcgcagccctcg
cctattcttgagttcttggaggagtggtccatggagaatctagaggagattgcaccctcg
gccatcgccgacgccaccaaaatctttgtcaacggctgctgggtaggtattcatcgtgat
cccgagcaattgatggccacgctgcgaaagttgcgtcgtcagatggacatcattgtgtcc
gaggtttccatgatccgtgatattcgggatcgcgagatacgcatctatactgatgcgggt
cgcatttgccggccattgcttatcgtggagaacggatcgctgctgctaaagaagacccat
gtggagatgctgaaggagcgcgactacaacaactacagttggcaggtgctggtggcttcc
ggcgtggtggagtatatcgacaccctcgaggaggaaacggtcatgatagccatgtcgccg
tacgatctaaagcaggacaaggactatgcctactgtacgacctacacccactgcgagatc
catccggccatgatccttggcgtttgtgcttctattatacccttccccgatcacaaccag
agtccgcgtaacacctatcaaagcgctatgggtaaacaagctatgggcgtgtacattaca
aatttccacgtgcgcatggacacacttgcccacgttctatactatcccatgaagcctttg
gtcaccacccgttccatggagtacctgcgcttccgagagctcccagctggcatcaattcg
attgtagccattctctgctacacaggctacaaccaggaggattctgtcatcttgaacgct
tctgcggtggagcgaggattcttccgctcggtattctaccgttcgtacaaggattcagag
aacaaacgcgtgggtgaccaggaggaaaactttgaaaaaccgcatcggggaacctgtcaa
ggtatgaggaatgcccattacgataagctcgacgatgatggtattattgccccgggtatt
cgtgtctccggcgatgatgtggtcatcggaaagactataactctgcctgaaaatgacgat
gagctggacagtaacacaaagcgttttgcgaagcgagacgcctcaaccttcctgcgaaac
tctgagactggcatcgtggaccaggtgatgctgaccctgaacagcgagggttacaagttc
tgcaagattcgagtgcgctcggtgcgcatcccacaaattggtgacaaattcgcctcccgt
cacgggcagaagggaacttgcggtatccagtacaggcaggaggatatggccttcacttgt
gagggtctggcgccagatattatcatcaaccctcatgccatcccctcgcgtatgacaatc
ggtcacttgatcgagtgccttcagggaaaacttggctccaacaagggcgagattggcgat
gccacacctttcaacgatgccgtcaacgtgcagaagatctccacgttcttgcaggagtac
ggctatcatcttcgtggcaacgaggtcatgtacaatggacacacggggcgaaagatcaat
gcccaggtatttttgggacccacctattatcagcgcctcaagcatatggtggacgacaag
attcactctcgggctcgaggtcccgtccaaattctcgtgcgtcagcccatggagggtcgt
gcccgtgacggtggccttcgtttcggtgagatggagcgtgattgccagatttcccacggt
gccgcacagttcctgagggagcgtctgttcgaggtctcggatccgtatcgggttcacatc
tgcaatttctgtggcctgatcgccattgccaatctgcgcaacaacacgttcgagtgcaag
ggctgcaagaacaagacgcagatctcgcaggtacgactcccctacgcggccaagctgctc
ttccaggagctcatgtccatgaatattgcgcctcgtctaatggttaattaa
DBGET
integrated database retrieval system
