Dermacentor silvarum: 119442956
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Entry
119442956 CDS
T07348
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119442956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119442956
Enzymes [BR:
dsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
119442956
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
119442956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
AAA_16
AAA_35
nSTAND3
MMR_HSR1
CbiA
AAA_22
ATP_bind_1
AAA_24
nSTAND1
Motif
Other DBs
NCBI-GeneID:
119442956
NCBI-ProteinID:
XP_037563970
EnsemblRapid:
LOC119442956
LinkDB
All DBs
Position
2:complement(239143788..239174221)
Genome browser
AA seq
425 aa
AA seq
DB search
MSEEKETKEEAAQEFRIDPESELRFEVEGKEKVTVELKSGLAEIFGVELVKNKKFTFGPG
AKVAVFTWHGCTLELSGKTEVAYVAKETPMIFYANIHAVLEQMRQKCEEDDSKGPTVLVV
GPTDVGKSSLCRILLNYAVRQGRRPIFVDLDVGQGHISIPGTIGAILVERPADVEEGFSQ
QAPLVYHYGHSTPGTNATLYNVLVSRLAEVISQRAESNKKASVSGIIINTCGWVKGAGYK
AITHAALAFEVDVVLVLDQERLYNELVRDMPGFVKVVFTPKSGGVVERSKSMRSESRDSR
VREYFYGFRTPLYPHSFDVKFSDVKMYKIGAPSLPDSCMPLGMKAEDNFTKLVPVPLGPN
VLHHILSLSFATSSDEDILQTNVAGFICVTEVDMERQTLTVLSPQPRPLPKGVLLLSEVQ
FMDSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagaaagagaccaaagaagaggccgcacaggaattccggatagacccggaa
tctgagctccgctttgaagtagaaggaaaagagaaggtcaccgttgagctgaagtctggc
cttgctgaaatatttggcgttgagctggtgaagaataagaagtttacatttggacctgga
gccaaagttgcagttttcacgtggcatgggtgcacgctggagctctctggaaagacagaa
gttgcctacgtggctaaggaaacgccgatgatattctatgccaacatccacgcagtgctt
gaacagatgcgacaaaagtgtgaagaggacgattccaagggacccacagtattggttgtt
ggacccacagatgttggaaagagcagtctctgtcgaatactcctaaattatgcagttcgt
caaggtcgacggccaatctttgtggaccttgatgtcgggcagggccacatatctatacct
ggaacaattggggccattttggtggagagaccagcagatgttgaagaaggcttttctcag
caggccccccttgtctaccattatggccatagtacaccagggaccaatgccacattgtac
aatgttcttgtttctcgacttgctgaagtcatcagccagcgtgctgaaagcaacaagaaa
gctagcgtcagtggcatcatcattaacacctgcggttgggtgaaaggagctggctacaag
gctattactcacgccgctcttgctttcgaagtggacgttgtcctagtgctggatcaggaa
cggctgtacaacgaactagtcagggacatgccaggattcgtcaaagtggtgttcacacct
aagtctggaggtgtcgtagagcggagcaagtccatgaggtcagaatccagggattcgagg
gtgagagagtacttctatggcttcaggacacctctgtatccacactctttcgatgtcaaa
ttttctgacgtcaaaatgtacaagataggtgcaccatctttaccagactcctgcatgcca
ctaggcatgaaggccgaggacaacttcacaaagctagtacctgttccactgggacccaat
gtgcttcaccacatactgagcctcagctttgcaactagcagtgatgaggatattctacag
actaatgtggccggctttatctgtgtaacggaagtggacatggagcggcaaacactgaca
gtgctctcaccacagccaaggcctctgccgaagggagtgctgctattgagtgaagttcag
ttcatggattcacactga
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integrated database retrieval system