KEGG   Dermacentor silvarum: 119442956
Entry
119442956         CDS       T07348                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dsv  Dermacentor silvarum
Pathway
dsv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119442956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsv03019]
    119442956
Enzymes [BR:dsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     119442956
Messenger RNA biogenesis [BR:dsv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     119442956
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N TniB AAA_16 AAA_35 nSTAND3 MMR_HSR1 CbiA AAA_22 ATP_bind_1 AAA_24 nSTAND1
Other DBs
NCBI-GeneID: 119442956
NCBI-ProteinID: XP_037563970
EnsemblRapid: LOC119442956
LinkDB
Position
2:complement(239143788..239174221)
AA seq 425 aa
MSEEKETKEEAAQEFRIDPESELRFEVEGKEKVTVELKSGLAEIFGVELVKNKKFTFGPG
AKVAVFTWHGCTLELSGKTEVAYVAKETPMIFYANIHAVLEQMRQKCEEDDSKGPTVLVV
GPTDVGKSSLCRILLNYAVRQGRRPIFVDLDVGQGHISIPGTIGAILVERPADVEEGFSQ
QAPLVYHYGHSTPGTNATLYNVLVSRLAEVISQRAESNKKASVSGIIINTCGWVKGAGYK
AITHAALAFEVDVVLVLDQERLYNELVRDMPGFVKVVFTPKSGGVVERSKSMRSESRDSR
VREYFYGFRTPLYPHSFDVKFSDVKMYKIGAPSLPDSCMPLGMKAEDNFTKLVPVPLGPN
VLHHILSLSFATSSDEDILQTNVAGFICVTEVDMERQTLTVLSPQPRPLPKGVLLLSEVQ
FMDSH
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgagtgaagagaaagagaccaaagaagaggccgcacaggaattccggatagacccggaa
tctgagctccgctttgaagtagaaggaaaagagaaggtcaccgttgagctgaagtctggc
cttgctgaaatatttggcgttgagctggtgaagaataagaagtttacatttggacctgga
gccaaagttgcagttttcacgtggcatgggtgcacgctggagctctctggaaagacagaa
gttgcctacgtggctaaggaaacgccgatgatattctatgccaacatccacgcagtgctt
gaacagatgcgacaaaagtgtgaagaggacgattccaagggacccacagtattggttgtt
ggacccacagatgttggaaagagcagtctctgtcgaatactcctaaattatgcagttcgt
caaggtcgacggccaatctttgtggaccttgatgtcgggcagggccacatatctatacct
ggaacaattggggccattttggtggagagaccagcagatgttgaagaaggcttttctcag
caggccccccttgtctaccattatggccatagtacaccagggaccaatgccacattgtac
aatgttcttgtttctcgacttgctgaagtcatcagccagcgtgctgaaagcaacaagaaa
gctagcgtcagtggcatcatcattaacacctgcggttgggtgaaaggagctggctacaag
gctattactcacgccgctcttgctttcgaagtggacgttgtcctagtgctggatcaggaa
cggctgtacaacgaactagtcagggacatgccaggattcgtcaaagtggtgttcacacct
aagtctggaggtgtcgtagagcggagcaagtccatgaggtcagaatccagggattcgagg
gtgagagagtacttctatggcttcaggacacctctgtatccacactctttcgatgtcaaa
ttttctgacgtcaaaatgtacaagataggtgcaccatctttaccagactcctgcatgcca
ctaggcatgaaggccgaggacaacttcacaaagctagtacctgttccactgggacccaat
gtgcttcaccacatactgagcctcagctttgcaactagcagtgatgaggatattctacag
actaatgtggccggctttatctgtgtaacggaagtggacatggagcggcaaacactgaca
gtgctctcaccacagccaaggcctctgccgaagggagtgctgctattgagtgaagttcag
ttcatggattcacactga

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