Desulfolutivibrio sulfoxidireducens: GD604_08735
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Entry
GD604_08735 CDS
T06821
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Pathway
dsx00540
Lipopolysaccharide biosynthesis
dsx01100
Metabolic pathways
dsx01250
Biosynthesis of nucleotide sugars
Module
dsx_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GD604_08735 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dsx01005
]
GD604_08735 (rfaD)
Enzymes [BR:
dsx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GD604_08735 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dsx01005
]
Core region
GD604_08735 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QLA19815
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All DBs
Position
1978362..1979333
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AA seq
323 aa
AA seq
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MHIVTGGAGFIGSAFVWKLNAMGVDDILVVDDLGTDDKFRNLVGRRFADYLHKDDFLSRI
QAETDPFGPTAFIHMGACSSTTETDAEMLMRVNYQYSKAVCRYALSRDARFINASSAATY
GDGSKGFDDDPAALDELRPLNMYALTKHLFDLWLRRHGLLDRVSSLKFFNVFGPNEHHKG
EMRSVVCKAFEKIKASGSLKLFKSDRTDYPDGGQKRDFIYVKDCLDVLWWLLEAPHVGGV
FNVGTGQARTWNDLAAAVFAAMDREPRIDYVDMPPALRGKYQYFTEARMERLRAAGYATP
MTSLEDAVRDYVTGYLATDNPCL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcgtcaccggcggggccggcttcatcggtagcgcgttcgtgtggaagctcaac
gccatgggcgtggacgacatcctggtcgtggacgacctgggcaccgacgacaagttcagg
aacctggtgggccgccgcttcgccgactacctgcacaaggacgactttctctcccgcatc
caggccgagaccgatcccttcggccccacggcgtttatccacatgggggcctgctcctcc
accaccgagaccgatgccgagatgctcatgcgcgtcaactaccagtattccaaggccgtg
tgccggtatgccctctcccgggacgcccgtttcatcaatgcctccagcgccgccacctac
ggcgacggatcaaagggcttcgacgacgacccggcggccctggacgagttgcggccgctg
aacatgtatgccctgaccaagcacctcttcgacctgtggctgcggcgccacgggctgctc
gaccgggtgtccagcctgaaattcttcaacgtcttcggccccaacgaacaccacaaggga
gagatgcgtagcgtggtgtgcaaggccttcgagaagatcaaggcctctgggagcctcaag
ctcttcaaatccgaccggacggattatcccgacggcggccagaaacgggactttatctat
gtcaaggattgtctggatgtcctgtggtggctgcttgaggccccgcatgtcggcggggtg
ttcaacgtgggcacggggcaggcccggacctggaacgacctggccgccgcggtctttgcg
gccatggaccgcgaaccccgcatcgactacgtggacatgcccccggcccttcgcggaaaa
taccagtatttcaccgaggcccgcatggagaggctgcgcgccgccggatacgccacgccc
atgacctcccttgaggacgcggtcagggactatgtgaccggctatctggccacggataat
ccctgcctgtga
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