KEGG   Candidatus Desulfovibrio trichonymphae: RSDT_0839
Entry
RSDT_0839         CDS       T05578                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
dtr  Candidatus Desulfovibrio trichonymphae
Pathway
dtr00740  Riboflavin metabolism
dtr01100  Metabolic pathways
dtr01110  Biosynthesis of secondary metabolites
dtr01240  Biosynthesis of cofactors
dtr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dtr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RSDT_0839 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RSDT_0839 (ribD)
Enzymes [BR:dtr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RSDT_0839 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RSDT_0839 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Bd3614-deam SNAD4
Other DBs
NCBI-ProteinID: BAV92351
UniProt: A0A1J1DR73
LinkDB
Position
complement(1123881..1125014)
AA seq 377 aa
MSEQDYAPFMREALALAQEGRFTACPNPTVGAVLVRDGRIVAGGFHRAAGDDHAEVACLK
NAAEGSRETVGATLVVTLEPCKHCGKTPPCTDAILAAGIARVVVGLADPNPLAGGGSVRL
REAGVEVIEGVLEQECRDLVADFLVWQETDRPYVILKMAATLDGRIAARNGQSRWIGSAA
SRRKVQQWRAGVGHCGGVVLVGGGTFRADNPRLTARDASVAGPQPLACVVTSCLPRADDA
AFLPAERPLQTIFFTSPAAAGSVEADRLRRRGVRVLDYGYGPHDGADFVALMRTLRQETG
SPYVLCEGGGRLALSLLEADMADEFRLHLAPSILGDNEAFPLFTGRAPLGMDEALRMRVS
ETSLCGGDVHLVLRPVV
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtgtctgagcaggactatgcgccctttatgcgcgaggcccttgcgctggcgcaagaggga
cgttttaccgcctgccccaaccctactgtgggcgctgtgctggtgcgcgacggccgtatt
gtggccgggggctttcaccgcgccgcgggggatgaccatgccgaagtggcctgcctgaaa
aatgcggcggagggcagccgggagactgtcggagccacacttgtggtcacgctggaaccc
tgcaagcattgcggaaaaacgccgccgtgcacagacgccatattagcggccggcatagca
agggtggttgtaggtctggcggatccgaaccctctggccggcggcggctccgtgcgtctg
cgcgaggccggcgtggaagtcattgaaggtgtactggaacaggaatgccgtgatcttgtc
gcggattttttggtctggcaggagacggaccggccgtatgtaattcttaaaatggccgcc
acgctggacggtcgcattgccgcgcgcaacggtcaatcccgctggatcggctccgctgct
tcacgtcggaaggtgcagcaatggcgcgcgggcgtcggccattgcggcggggttgttctt
gtgggcggcggcacattcagggcggacaacccccggctcactgcgcgggacgcatccgtt
gccgggccccagcctcttgcctgtgttgtcacgtcgtgtctgccgcgggctgacgacgcg
gcgtttttgccggcggagcggcccttgcagacaattttttttacgtctcccgcagcggcc
gggtctgttgaagccgatcggcttcgccgcaggggcgtgcgcgtgctggactatgggtat
ggaccgcacgacggggcggattttgttgcgcttatgagaaccctgcggcaggagacgggc
agcccgtatgtgctttgtgaaggagggggacggctcgccctgtctcttctggaggcggat
atggcggacgaatttcgcctgcatctcgcgccctccattttgggagacaatgaagctttt
cccctgttcaccggtcgtgcgcccctgggcatggacgaagcgctgcgcatgcgggtgagt
gaaacaagcctttgcggcggagacgtgcatcttgtgctgcggcctgttgtataa

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