Duganella dendranthematis: HH213_15835
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Entry
HH213_15835 CDS
T06560
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dug
Duganella dendranthematis
Pathway
dug03030
DNA replication
dug03410
Base excision repair
dug03420
Nucleotide excision repair
dug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH213_15835 (polA)
03410 Base excision repair
HH213_15835 (polA)
03420 Nucleotide excision repair
HH213_15835 (polA)
03440 Homologous recombination
HH213_15835 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dug03032
]
HH213_15835 (polA)
03400 DNA repair and recombination proteins [BR:
dug03400
]
HH213_15835 (polA)
Enzymes [BR:
dug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH213_15835 (polA)
DNA replication proteins [BR:
dug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HH213_15835 (polA)
DNA repair and recombination proteins [BR:
dug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HH213_15835 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH213_15835 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QJD91421
LinkDB
All DBs
Position
3471246..3474017
Genome browser
AA seq
923 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSADGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVKAMGWPILMVEGVEADDVIGTLSYE
AAKAGMNVVVSTGDKDLAQLVNDKVMLINTMTNEKMDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVSKCGPKTALKWLSAYDSLDGVIANADKITGAVGQNLRDALAWLPKGRELIT
VKLDCDLTGHMVSISESLVAREEDKESLLAFFGKYGFKTLLRELGVAASTPAGAPASTVK
VSLDAPVGGAASMNGDLFAEPVIATYETVSTDAQLDQWIARIHAADLTAVDTETTSLEPM
TAQLVGISLSVKPGEACYIPVAHAYQGVPAQLEREHVLAKLKPWLEDASKLKVGQNLKYD
SHIFANHGVSLQGIHHDTLLESYVFESHRTHDMDSLALRHLNHTTIPFVDVCGKGVNMIT
FDQVAIDRATEYAAEDADITLRLHQNMIGEVEKDEKLNFIYRNIELPTAVVLQKIERNGV
QIDAALLAQQSNELGARIVELEAKAHELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPSG
APSTDEEVLQKLAEDYPLPKVLLEYRSLSKLKSTYTDKLPKGINAQTGRVHTNYAQAVAV
TGRLASNDPNLQNIPIRTKEGRRIREAFVAPAGSHIVSADYSQIELRIMAHISEDENMLR
AFAEGVDIHRATAAEIFGVAPESVENEQRRYAKVINFGLIYGMSAFGLASNLGIERGAAQ
SYIERYFARFSGVKQYMDDTRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAIN
APMQGTAADLIKLAMIAVQNWLETEKLGTRMIMQVHDELVLEVPDAELELIKQKLPELMA
GVAQLKVPLIAEVGVGSNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataccctgttgttagtagacggctccagctatctttatcgcgctttccatgcg
ctgcccgacctgcgcagcgccgacggccacccgaccggcgccatgcacggcatggtcaat
atgctgcgccgcctgcgcgcggactatccggccgcctacatcgcctgcgtattcgacgcc
aagggcaagactttccgcgacgatatgtatccggaatacaaggccacgcgcgcctcgatg
ccggacgacctgcgcctgcagatcgagccgatccacgaggcggtcaaggccatgggctgg
ccgatcctgatggtcgagggcgtggaggccgacgacgtcatcggcacgctgtcgtacgag
gcggccaaggcgggcatgaacgtggtggtgtccaccggcgacaaggatctggcgcagctg
gtcaacgacaaggtcatgctgatcaacaccatgaccaacgagaagatggacgaggctggc
gtgctggccaagttcggcgtgccgccgaaccgcatcatcgattacctgaccctgatcggc
gacaccgtcgacaacgtgccgggcgtgagcaagtgcgggccgaagacggcgctgaaatgg
ctgagcgcctacgattcgctggatggcgtgatcgccaacgccgacaagatcaccggcgcc
gtcggccagaacctgcgcgatgcgctggcatggctgccgaagggccgcgaactgattacc
gtcaagctggactgcgacctgaccggccacatggtgtcgatcagtgaatcgctggtcgcg
cgcgaggaagacaaggaatcgctgctggccttcttcggcaaatacggcttcaagacgctg
ctgcgcgaactgggcgtggcggccagcacgccggccggcgcgccggcctcgaccgtgaaa
gtgtcgctggacgcgccggtcggcggcgcagcctccatgaatggcgacctgttcgccgaa
ccggtcatcgccacttacgaaacggtcagcaccgacgcgcagcttgaccagtggatcgcc
cgcatccatgccgccgacctgaccgcggtcgataccgaaaccacttcgctggaaccgatg
acggcgcagctggtcggcatttcgctgtcggtcaagccgggcgaggcctgctacatcccg
gtggcgcacgcctaccagggcgtgccggcgcaactggagcgcgagcatgtgctggccaag
ctcaagccgtggctggaagacgccagcaagctcaaggtcggccagaacctcaagtacgac
agtcacatcttcgccaaccatggcgtgtcgctgcaaggcatccatcacgatacgctgctg
gaatcgtatgtgtttgaatcgcaccgcacgcacgacatggacagcctggcgctgcgccac
cttaaccacaccacgattccgttcgtggacgtgtgcggcaagggcgtcaacatgatcacc
ttcgaccaggtggcgattgaccgcgccaccgagtacgcggcggaagacgccgacatcacg
ctgcgcctgcaccagaacatgatcggcgaggtggagaaggacgagaagctgaacttcatc
taccgcaacatcgaactgccgacggcggtggtgctgcaaaagatcgagcgcaacggcgtg
cagatcgacgccgcgctgctggcgcagcagtcgaacgaactcggtgcgcgcatcgtcgag
ctggaagccaaggcgcatgagctggccgagcagccgttcaacctcggctcgccgaagcag
atcggcgagattttcttcgagaagctgaagctgccggtggtcaagaaaaccccgagcggc
gcgccatcgaccgacgaggaagtgctgcaaaagctggccgaggattatccgctgccgaaa
gtgctgctggaataccgcagcctgtccaagctgaaatcgacctacaccgacaagctgccg
aagggcatcaacgcgcagaccggccgcgtgcataccaattacgcacaggcggtggcggtg
acgggacgcctggcgtccaacgatccgaatctgcaaaacattccgatccgcaccaaggaa
ggccgccgcatccgcgaggcgtttgtggcgccggccggctcgcacattgtgtcggccgac
tattcgcagatcgaactgcgcatcatggcgcacatttcggaagacgaaaacatgctgcgc
gcgttcgccgagggcgtggacattcaccgcgccaccgccgccgaaattttcggcgtcgcg
ccggagtcggtggaaaacgaacagcgccgctacgccaaggtgattaacttcggcctgatt
tacggcatgagcgcgttcggcctggccagcaacctgggcatcgagcgcggtgcggcgcag
agctacatcgagcgttactttgcgcgcttctcgggcgtcaagcagtacatggacgacacg
cgcctgcaggccaaggcgcgcggttatgtggagacggtgttcggccgccgcctgtggctg
ccggagatcaattcgccgaacggcccgcgccgccagggcgccgaacgcgcggcaattaac
gcgccgatgcagggcacggccgccgacctgatcaagctggccatgatcgcggtgcagaac
tggctggaaaccgagaagctgggcacgcgcatgatcatgcaggtgcacgatgaactggtg
ttggaagtgccggacgccgagctggaactgatcaagcagaaactgccggagctgatggcc
ggcgtggcgcaattgaaggtaccgctgatcgctgaagtaggggttggcagcaactgggat
gaagcacactaa
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