Duncaniella sp. C9: E7745_10825
Help
Entry
E7745_10825 CDS
T09932
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
duq
Duncaniella sp. C9
Brite
KEGG Orthology (KO) [BR:
duq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
duq03009
]
E7745_10825 (rimO)
Enzymes [BR:
duq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E7745_10825 (rimO)
Ribosome biogenesis [BR:
duq03009
]
Prokaryotic type
ribosomal protein modification factors
E7745_10825 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NAGidase
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCD39986
LinkDB
All DBs
Position
complement(2589518..2590846)
Genome browser
AA seq
442 aa
AA seq
DB search
MTNKIAVITLGCSKNLVDSERLMVMLSDVGYEVVDAATEAFLEADGWKGVVINTCGFIGD
AKEESINEILAWCQAKTDGRIAALFVMGCLSQRYASQLPAEIPEVDRWYGKTDWPALAVD
LARRSPATAPYDRVITTPRHHAYIKIAEGCNRFCAFCAIPLITGRYKSRPIDEIIAEVRM
LVSRGVREFNVIAQDLTNYGKDLYGKVEIARLVDEMAAVEGVEWIRLHYAYPKDFPLELL
DVMARRDNICKYLDIALQHCADTVLTNMRRHITGAETRSLLAEIRRRVPGIHIRTTLMVG
FPGEGDDEFAELLDFVREQRFERMGAFAYCEEEDTFGARNFEDSIPQEVKDERLSQLMEL
QEKISLEIQEEKVGSVMRVVIDREEPEFYVGRTEFDSPEVDPEVLVSKIFRLEKGRTYNV
KITSALPFELMAEPLAETLDPA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaatagcagtcatcacccttggctgttcgaaaaaccttgtggattcggag
cgtctgatggtgatgctctccgatgtgggctacgaggttgtcgacgccgccaccgaagcc
ttccttgaagccgacggatggaaaggcgtcgtgataaacacctgcggattcatcggcgat
gccaaggaagaatccattaacgagatcctcgcctggtgccaggccaaaaccgatggccgc
atcgccgcgctttttgtcatgggatgtctctcccagcgctatgcttcgcagcttccggca
gaaataccggaggtagaccgctggtatggcaaaacggactggcctgcgcttgccgtagac
ctcgcacgccgctccccggccactgctccgtatgaccgtgtcataaccacgccccgccac
cacgcctacataaagatagctgaaggttgcaatcgtttctgcgcattctgcgccataccg
ttgataacaggccgctacaagtcgcgcccgattgatgagatcatcgcggaagtccgcatg
cttgtcagtcgcggagtcagagagttcaacgtcatagcccaggatcttactaactatggc
aaagacctttacggcaaggtagagatagcgcgtcttgtcgatgaaatggcggcagtggaa
ggtgtggagtggatacgtctgcattatgcctatccgaaagactttccgcttgaattgctt
gacgtgatggcccgtcgcgacaatatctgcaaatatctcgacattgcgctccagcattgc
gccgatactgtcttgaccaacatgcgccgccacatcaccggagctgaaacccgcagcctt
ctcgccgaaatccgcaggagagtccctggaattcacatccgcaccactctgatggtaggc
tttccgggtgaaggcgatgatgaattcgccgaacttctcgattttgtgcgtgaacagcgc
tttgagcgcatgggcgcttttgcctattgcgaggaagaagacaccttcggcgcgcgtaat
tttgaagattctataccccaggaggtcaaagacgagcgcctgtctcaactgatggaactt
caggaaaagatttcgctggagatccaggaagagaaagttggatcggtgatgcgcgtcgtt
attgaccgtgaagaacctgaattctatgtgggccgcacggagtttgactctcctgaagtc
gatccggaagtgcttgtctccaaaattttcagactggagaagggcagaacatataatgta
aaaataacttcggctcttccttttgaactcatggcggagcctcttgccgaaacattggac
cctgcatga
DBGET
integrated database retrieval system
