Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0417
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Entry
DvMF_0417 CDS
T00816
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00020
Citrate cycle (TCA cycle)
dvm00620
Pyruvate metabolism
dvm01100
Metabolic pathways
dvm01120
Microbial metabolism in diverse environments
dvm01200
Carbon metabolism
dvm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DvMF_0417
00620 Pyruvate metabolism
DvMF_0417
Enzymes [BR:
dvm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
DvMF_0417
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_C
Biotin_carb_N
HMGL-like
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl
ATPgrasp_Ter
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACL07374
UniProt:
B8DJQ2
LinkDB
All DBs
Position
complement(489026..492730)
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AA seq
1234 aa
AA seq
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MGIKTFEQVLEEVRGKAILVANRGIPARRICRSIRERFDAVAVMTATDIDKTSPAASAAQ
ELLLLGSDPRAYLDIDHIIALAKQRGIVAIHPGWGFASEDERFPAKCKAAGLTFIGSTAE
AMNLLGNKVQVRKLAKKLDIPVVPGSEGAVDIPTARTIIDEIGLPVMLKAEGGGGGRGIF
AIHRAEELSDAFMKASTMAQASFGNPRLYVEKYLPSVRHIEIQVIADMYGNVFAFDERDC
TVQRNHQKLIEITPSPWSGITPELRERLKEYSRMLVREVGYHSLCTVEFLVTADGTPYLI
EVNTRLQVEHGITECRYGIDLVEEQIAVAFGARLRFTEENTTPQHVAMQVRINCEDPQNH
FAPNSGLVSRYVSPGGPGVRLDSNMCAGYEFPSNYDSAGSLLIAYGQGWEKVLGIMERCL
GEYVIGGIKTTVPFYKQVLKHPKFRAGDLDTNFIANTPELMCYSDLAPEAERLARLVAEV
SAKGYNPYVQLGEYRTRETPRMPRFEPVLPHIPGTVRRAPSPYPTGDRTALLDYLRDAGH
VHFTDTTPRDMTQSNSGNRFRLAEDALIGPYLDNCGFFSIENGGGAHFHVALLANMTYPF
SEAKEWNRFAPKTLKQILIRSTNVLGYKPQPKNLMRMTGEMVCDTHHIIRCFDFLNHIEN
MRPFAEVALNRTDVVFEPALSLSWAKGFDVDHYLGVTEEVLRMVGSVAGVGPDQAARMII
LGLKDMAGMCPPRFMTALVTALRKRWPSLVLHYHRHYTDGLFVPSVGAAAKAGAHIVDVA
LGASVRSYGQGDVLATAAYLEDELGLKTNLNKNMIRDCNFVLKQIMPYYDRYCAPYFQGI
DHDVVEHAMPGGATSSSQEGAMKQGYIHLLPYMLKFLAGTRKIVRYHDVTPGSQVTWNTA
FLAVTNAYKRGGEEEVRYLLEVLDHVARHDEADLTAEMRKARLSIYQDCNDAFRNLLLGR
FGKLPLGFPADWVYESAFGNEWKKAIASRTEASPLDSLTDVDLAAEERGYVEIMRRKPTE
EEFVLYLNHPGDAIKTIQLRARFGNPNNLPLDVWFEGVAPGEDLNFVDSNGKPHHLALLS
ISRPNEAGMSVVRYVLDSEFMSCEVQVAKAAVADGKGSEKADPSNPMHVAAPSNGDLWVM
YVHPGDVVKQGEELFNISIMKQEKAVLAPVSGMVKRVLKTADYRESKQMMPVREGELIVE
LGPIPRTCPNAACSRPITMEGIDFCPYCGEPLNP
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaagaccttcgagcaggtgttggaagaggtgaggggcaaggcgattctggtg
gccaaccggggtatcccggcccgccggatctgtcgttccatccgcgaacgcttcgatgcc
gtggccgtgatgaccgccaccgacatcgacaagacctctccggccgcctccgcagcgcaa
gaactgctgctgctgggttccgaccccagagcgtatctggacatcgaccacatcatcgcg
ctggccaaacagcgcggcatcgtcgccatccatcccggatggggcttcgcctccgaagac
gaacgcttccccgccaaatgcaaggccgccgggctgaccttcatcgggtccaccgcagag
gccatgaacctgctgggcaacaaggtgcaggtccgcaaactggcaaagaagctggacatc
cccgttgttcccggttccgaaggggccgtggacattcccaccgcgcgcaccatcatcgac
gagatcggcctgccggtcatgctgaaggcggaaggcgggggcggcggccggggcatcttc
gccatccatcgggccgaagaactttccgatgccttcatgaaggcgtccaccatggcccag
gcctcgttcggcaacccgcgcctgtacgtcgaaaagtacctgccctcggtgcgccacatc
gaaatccaggtcatcgccgacatgtacggcaacgtgttcgcctttgacgaacgcgactgt
accgtgcagcgcaaccaccagaagctcatcgagatcaccccgtcgccgtggtcgggcatc
acccccgaactgcgcgaacggctgaaggaatactcgcgcatgctggtgcgcgaggtgggc
taccattcgctgtgcaccgtggagttcctggtcaccgccgacggcacgccgtacctgatc
gaggtgaacacccgcctccaggtggagcacggcatcaccgaatgccgctacggcatcgac
ctggtggaagagcagatcgccgtggccttcggggccaggctgcgtttcaccgaggaaaac
accacgccgcagcacgtggccatgcaggtgcgcatcaactgcgaagacccgcagaaccat
ttcgcccccaactccggcctggtcagccgctacgtgtcgcccggcggccccggcgtgcgc
ctggactcgaacatgtgcgcgggctacgagtttccgtccaactacgactcggcgggatcc
ctgctcatcgcctacgggcagggctgggaaaaggtgctcggcatcatggagcgctgcctt
ggcgagtacgtcatcggcggcatcaagaccaccgtcccgttctacaagcaggtgctgaag
caccccaagttccgcgcgggcgacctggataccaacttcatcgccaacaccccggaactg
atgtgctactccgacctcgccccggaggcggagcgcctggcccggctggtggccgaggtt
tcggccaagggttacaacccctacgtgcagctgggtgaataccgcacccgcgaaaccccg
cgcatgccccgtttcgagccggtgctgccacacattcccggcaccgtgcgccgcgcgccc
tcgccgtatcccaccggcgaccgcaccgcgctgctggactacctgcgcgacgcgggccac
gtgcacttcaccgacaccaccccccgcgacatgacccagtcgaacagcggcaaccgcttc
cgcctggcggaagacgcgctgatcggcccgtacctggacaactgcgggttcttctccatc
gagaacggcggcggcgcccacttccacgtggcgctcctggccaacatgacctacccgttc
tcggaagcgaaggaatggaaccgcttcgcgcccaagacgctgaagcagatactcatccgt
tccaccaacgtgctggggtacaagccgcagcccaagaacctcatgcgcatgaccggcgag
atggtgtgcgatacccaccacatcatccgctgcttcgacttcctgaaccacatcgagaac
atgcgccccttcgcggaagttgcgctgaaccgcaccgacgtggtcttcgaaccggcgctg
tcgctgtcgtgggccaagggcttcgacgtggaccactacctcggcgtcaccgaggaagtg
ctgcgcatggtgggcagcgtggccggggttggtcccgaccaggccgccagaatgatcatc
ctgggcctcaaggacatggcgggcatgtgcccgccccggttcatgaccgccctggtcacc
gccctgcgcaagcgctggccctctctggtgctgcactaccaccgccactacaccgacggc
ctgttcgtgccgtccgtgggtgccgccgccaaggcgggcgcgcacatcgtggacgtggcc
ctgggcgcctcggtgcgttcgtacgggcagggcgacgtgctggccactgccgcctacctc
gaggacgagctgggcctgaagaccaacctgaacaagaacatgatccgcgactgcaacttc
gtgctcaagcagatcatgccgtactacgaccgctactgcgcgccgtacttccagggcatc
gaccacgacgtggtcgagcacgccatgcccggcggggccacctcgtcgtcgcaggaaggg
gccatgaagcaggggtacatccacctcttgccgtacatgctcaagttcctggcgggcacc
cgcaagatcgtgcgttaccacgacgtgacgcccggctctcaggtgacctggaacaccgcc
ttcctggccgtgaccaacgcctacaagcgtggcggcgaagaagaagtgcgctacctgctg
gaagtgctggaccacgtggcccggcacgacgaggccgacctgacggcggaaatgcgcaag
gcgcgcctgtccatctaccaggactgcaacgacgccttccgcaacctgctgctgggccgc
ttcggcaagctgcccctcggctttccggcggactgggtgtacgaaagcgccttcggcaac
gaatggaagaaggccattgcttcgcgcaccgaggcatcgcccctcgattcgctgaccgac
gtggacctggcggcggaagagcgcggctatgtcgagatcatgcgccgcaagcccactgaa
gaagagttcgtcctgtacctgaaccaccccggcgacgccatcaagaccatccagttgcgg
gcccgcttcggcaaccccaacaacctgccgctggacgtgtggttcgagggcgtggccccc
ggcgaggacctgaacttcgtcgattccaacggcaagccgcaccatctggcgctgctcagc
atctctcgccccaacgaggcgggcatgagcgtggttcgctacgtgcttgattccgagttc
atgagctgcgaggtgcaggtggccaaggccgccgtggcggacggcaagggctcggaaaag
gccgacccgtccaaccccatgcacgtggccgcgcccagcaacggcgacctgtgggtgatg
tacgtgcaccccggcgacgtggtgaagcagggcgaggagttgttcaacatctccatcatg
aagcaggaaaaggcggtgctggccccggtttccggcatggtcaagcgcgtgctgaagacc
gccgactaccgcgaaagcaagcagatgatgcccgtccgcgagggcgagctgatcgtggag
ctcgggcccatcccgcgcacctgccccaacgcggcgtgctcgcggcccatcaccatggaa
ggcatcgacttctgcccctactgcggcgaaccgctgaacccataa
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