KEGG   Drosophila yakuba: Dyak_GE12306
Entry
Dyak_GE12306      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
dya  Drosophila yakuba
Pathway
dya03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dyak_GE12306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dya03021]
    Dyak_GE12306
Enzymes [BR:dya01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Dyak_GE12306
Transcription machinery [BR:dya03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     Dyak_GE12306
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Fasciclin CDC45
Other DBs
NCBI-ProteinID: EDW91040
FlyBase: FBgn0230061
UniProt: B4P775
LinkDB
Position
2R
AA seq 1642 aa
MGSKRAMDVHMFPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYG
KCMDPCGTCLKLQDCPGHMGHIELGTPVYNPFFIKIVQRLLCIFCLHCYKLQMKDHECEI
IMLQLRLIDAGYIIEAQELELFKSEIVCQNSDELVALKNGDMVHPHIAAMYSLLENNGKN
SSNSTKTSCSLRTAITHAALQRLGKKCRHCNKSMRFVRYMHRRLVFYVTLADIKERVGTG
AETSGQNKVIFADECRRYLRQIYANYPDLLKLLVPVLGLSNTDLTQGDRSPVDLFFMDTI
PVTPPRARPLNMVGDMLKGNPQTDIYINIIENNHVLNVVLKYMKGGQEKLTDEAKAAYQT
LKGDTAHEKLYAAWLALQMSVDVLLDVNMSREMKSGEGLKQIIEKKSGLIRSHMMGKRVN
YAARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYIQ
DKNGFTTYIPADNASKRESLAKLLLSNPKDGVKIVHRHVLNGDVLLLNRQPSLHKPSIMG
HKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVPKD
GTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSQHKKDIKLLPPTILKPAMLWS
GKQVLSTIIINIIPEGYERINLDSFAKIAGKNWNASRPRPSICGTNPEGNELSESQVQIR
NGELLVGVLDKQQYGATTFGLIHCMYELYGGDVSTQLLTAFTKVFTFFLQLEGFTLGVKD
ILVTGEADRKRRKIIRECRNVGNSAVSAALELEDEPAHDELVEKMEAAYVKDSKFRVLLD
RKYKSLLDGYTNDINSTCLPGGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELE
GKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKT
SRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNDKFCADFLT
QNATAILRPTHLQLMKDEEQLAKVQRHEKHIRSWQKKKPTKLRAAFTHFSEELREEVEVK
RPNEINTKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPTVAVYKQDLYYGSVSER
TRKLINDYAKRKPALKETIADIMRVKTIKSLASPGEPVGLIAAQSIGEPSTQMTLNTFHF
AGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGHQHQAEKLRINLNSVTLANLLE
SVHVSTGLTLEPERAYEYDMRFQFLPREVYKEDYGVRPKHIIKYMHQTFFKQLIRAILKI
SSASKTTKIVVIDDKKDGDKEDDNDLDNADEVGRSKAKANDDDSSDDNDDDDATGVKLKQ
RKTDEKDYDDPDDVEELHDANADDEEAEDEDDEEKGQDANDNDGDDKAVERLLSNDMVKG
YTYDKENHLWCQVKLNLSVRYQKPDLTSIIRELAGKSVVHQVQHIKRAIIYKGTDDEQLL
KTDGINIGEMFQHNKILDLNRLYSNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDR
RHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSS
RLMVGLPVRNGTGAFELLTKIC
NT seq 4929 nt   +upstreamnt  +downstreamnt
atgggttctaagcgggcgatggacgtgcacatgttcccctcggacttggagttcgccgtg
tttacggaccaggagatacgcaaactgagcgtggtgaaggtgatcacaggcatcacgttc
gatgcactgggacacgcgatacctggtggtctgtacgacatacgaatgggctcctacggc
aagtgcatggatccctgtgggacgtgtcttaagttgcaggactgcccgggccacatgggc
cacatcgagctgggcacgcccgtctacaatcccttcttcatcaagattgtgcagcgactt
ctctgcattttctgtttgcattgctacaagctccagatgaaggatcacgaatgtgagata
atcatgctacagctgcgcctaatcgacgcgggctacataatcgaggcccaggagttggaa
ctctttaagtcagaaatagtgtgccaaaacagcgacgaactggtggcccttaaaaacggc
gatatggtgcacccacacattgctgccatgtatagtctgttggaaaacaatgggaagaat
tccagcaactccaccaaaacgagttgctctctgcgcacggccattacgcatgcggcactg
cagcgactgggaaagaagtgcaggcactgtaacaagtctatgcgtttcgtgcgttatatg
catcgcaggctggtattttacgtgactttggcagatattaaagaacgcgttggtacgggc
gcagaaaccagtggccagaataaagtgatctttgcagacgaatgccgtcgttatctgcgc
cagatatacgcaaattaccctgatctattaaagcttctagtgcctgttttggggctgagc
aacacggatttgactcagggcgatagatcgccggtggatctgtttttcatggacacgatt
ccggtaacgccgccgcgcgctcgaccactgaacatggtcggtgacatgctgaagggaaat
ccccaaacggacatctacattaacatcattgaaaacaaccatgtattgaatgtggttctt
aagtacatgaagggcggccaagagaagctgacagacgaagctaaggccgcctatcagacc
ctaaaaggcgacacagcccatgagaaattgtatgcggcttggttggctcttcagatgtcg
gtggatgtgctcctcgatgtgaatatgtcgcgggaaatgaaatctggtgaaggtctgaag
caaatcattgagaagaagagtggtctcattcgtagccacatgatgggaaaacgtgtaaat
tacgccgcacgaaccgttattaccccggatcccaatataaacgtagatgagatcggtatc
cctgatatattcgcgaagaaactgtcgtatcccgttcccgtgaccgaatggaatgttaca
gagctgcgcaaaatggtaatgaacggtccggacgtgcatcccggagccaactacatacag
gacaagaacggattcacaacatatataccggcagacaacgcttccaagcgagagagtttg
gccaagctgcttttgtcgaatccaaaggatggtgttaagatcgttcatcggcacgttctc
aacggcgatgtcctactgcttaaccgacagccctcgctgcataagccatcgattatggga
cacaaggctcgcatcctgcacggcgaaaagactttccgcctgcactactcgaactgcaaa
gcatacaacgccgattttgacggtgatgaaatgaatgcccactatccgcagagtgaggtg
gcgagggcggaggcttacaaccttgtgaatgtggccagcaactatttggtgcccaaggac
ggcacaccgttaggtggactcattcaggatcacgtgatttcgggtgtaaaactttcgatt
cgtggacgattcttcaatcgtgaagactaccagcaattggtttaccagggactatctcaa
cataagaaggatatcaagctgctgccaccgactattttaaagccagctatgctttggtct
ggaaagcaggttttgtccaccattattataaacataattcctgagggatacgagcgaatt
aatctggattcatttgccaagattgctggaaagaattggaacgcgtcccgtccgcgaccg
tcgatttgtggcacaaatcctgaaggtaacgagctaagtgaaagtcaagtgcaaatcaga
aacggcgaacttcttgttggtgttctggataaacagcagtatggagccaccacttttgga
ttgattcactgcatgtatgagctgtacggcggcgatgtgtccactcaactgctcacggct
ttcacgaaagtattcaccttctttctacagctagaaggttttactttgggtgtcaaggat
attcttgttaccggcgaagcagatcgtaagagaagaaagattattcgcgagtgtcgcaat
gtgggaaacagtgcagtatctgctgctctagaattggaagatgaaccggcgcacgatgag
ctggttgagaaaatggaagcggcatatgtgaaggattcaaagttccgagtgcttttggat
cgtaaatacaaatcacttttagatggctacacaaatgacattaatagtacttgtttgccc
ggaggtctgatcaccaagttcccatcaaacaatctgcaattgatggttctatctggcgcg
aagggatcgatggtgaacactatgcaaatttcctgtctgctcggacaaattgagttagag
ggaaagcgaccgcctctgatgatatccggcaagtctctgcccagctttacttccttcgaa
acatcgcccaagtctggaggttttatcgatggacgctttatgaccggcattcagccgcag
gactttttcttccattgcatggctggtcgtgaaggtctcattgatactgctgtaaaaaca
tcgcgttccggttatctccagcgctgtcttattaagcatctggagggcctaagtgtacat
tatgatctcactgtacgcgacagtgacaatagtgtggttcagttcctgtatggcgaggat
ggtttagacattctgaagtccaaatttttcaacgataagttttgtgctgacttccttacc
caaaacgccacggcaattctacggcccactcatcttcaattgatgaaggacgaggaacag
ctggccaaggtccagcgccacgagaagcacatccgcagctggcaaaagaaaaagccaact
aagctacgtgccgccttcactcatttttccgaggagctccgcgaggaggtggaggtgaag
cgacccaatgagattaataccaaaacgggacgtcggcgctttgatgagggcctccttaag
ttatggaaaaaggccgatgcagaggacaaggccttatatcgcaagaagtacgcccgttgc
ccggatcccacggtagctgtctacaagcaggatctttactacggcagtgtgtcagaaagg
acgcggaaacttattaatgattatgctaaaaggaagccagcacttaaggagactatagcc
gatattatgcgagtaaagacaattaagtcgctggcctcgccaggtgaaccagtaggtctt
atagcagcccaatcgataggagaaccctcgactcagatgacactgaacactttccatttt
gcgggtcgtggtgaaatgaacgtgactctgggtattcctcgactacgagaaatcctcatg
ctggcctcatcaaacatcaaaacgccttctatggatattcccataaagcctggtcatcag
catcaggctgaaaagctgcgcataaatctaaattcagtgacgctggcaaaccttttggag
tccgttcatgttagcactggtttgaccctggagccggagcgagcctatgagtatgatatg
cgcttccaattcctacccagggaggtttataaggaggactatggtgtgcgacccaagcac
ataataaaatacatgcaccagaccttctttaaacaattgattcgcgccattttaaagata
tcaagtgcttctaaaacaacgaaaatagttgtaatagacgataaaaaggacggcgataaa
gaagatgataatgatttggacaacgccgatgaagtgggccgttctaaagcgaaggctaat
gatgacgattcatcagacgacaatgatgatgacgatgcaactggagtaaagctgaagcaa
cgaaaaaccgacgagaaggactacgatgatccagatgacgttgaagaactccatgatgcc
aatgccgatgacgaagaggcggaggatgaggacgacgaggaaaagggtcaggatgctaat
gataatgatggcgatgacaaagcggtggagaggttgctaagcaacgatatggtcaaaggg
tatacctacgacaaggagaaccatttgtggtgccaggtgaagttgaatctgagtgtgcgg
taccagaagcccgatctaacctccattatacgggagttggcgggcaagagtgtggttcac
caggtgcagcacatcaagcgagctattatctacaagggcaccgatgatgaacagctcctc
aagaccgacggcatcaacattggcgagatgttccagcacaacaagattcttgatctgaac
cgcctatactccaacgacatccacgcgattgcgaggacgtacggcatcgaagcagcgtcc
caagtgatcgttaaggaagttagcaatgtgttcaaggtgtacggaattactgtagatcgg
cggcacttgtcgctcattgccgactacatgactttcgacggcacctttcagccgttgtcg
cgaaagggcatggagcactcctcatcgcccctgcagcagatgtccttcgagtccagcttg
cagttcctcaagagcgccgctggatttggcagagcggatgagcttagctcaccgtcgagt
cggctgatggttggcctcccggtgcggaacggtactggtgccttcgagttgctgacgaaa
atttgttaa

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