KEGG   Drosophila yakuba: Dyak_GE18688
Entry
Dyak_GE18688      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
dya  Drosophila yakuba
Pathway
dya03020  RNA polymerase
dya03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dyak_GE18688
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dyak_GE18688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dya03021]
    Dyak_GE18688
   03400 DNA repair and recombination proteins [BR:dya03400]
    Dyak_GE18688
Transcription machinery [BR:dya03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     Dyak_GE18688
DNA repair and recombination proteins [BR:dya03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Dyak_GE18688
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-ProteinID: EDW88361
FlyBase: FBgn0236088
UniProt: B4P3R0
LinkDB
Position
2L
AA seq 275 aa
MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADL
KSSNAKVLPVTSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPT
AGVCFEYDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFFNVESSGAL
KPENIVVMGVQVLKNKLSNLQTQLSHESQNDALAV
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagccgtccgtgcagataaccgagctgacggacgacaacgtgaag
ttcgtcctggaggacacggaattgagcgtggccaacagcttgcggcgagtgttcatcgcg
gagacgccgacgctggccatcgactgggtgcaactggaggccaactctacggtactctcg
gatgagtttctggcccaccggatcggcctgatcccgctaatctccgacgacgtcgtggag
cggctgcagtacacccgcgactgcatctgcctggacttctgccccgagtgcagcgtggag
ttcaccctggacgtgaagtgcagcgaggagcaaacgcgccacgtgaccaccgccgatctc
aaatcgagcaatgctaaggtcctgccggtgacgtcccgcaaccagggcgaggaggacaac
gaatacggcgagagcaacgatgagatcctcataatcaaactgcgcaagggacaggagctg
aagcttcgcgcctacgccaaaaagggatttggcaaggagcacgccaagtggaatcccacg
gctggcgtgtgctttgagtacgaccccgacaactccatgcgacacactttatatcccaaa
cctgatgagtggcccaagagcgagcacaccgaactggaggacgaccagtacgaagcgccc
tacaactgggaagccaagccaaacaagttcttctttaacgtcgaatcctccggggccctc
aagcccgagaatatcgtggtcatgggcgtgcaggtgctgaagaataagctgtcaaatctg
cagacgcaactcagccacgagtcccaaaatgatgccctggccgtttga

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