KEGG   Drosophila yakuba: Dyak_GE24228
Entry
Dyak_GE24228      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
dya  Drosophila yakuba
Pathway
dya03020  RNA polymerase
dya03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dyak_GE24228
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dyak_GE24228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dya03021]
    Dyak_GE24228
   03400 DNA repair and recombination proteins [BR:dya03400]
    Dyak_GE24228
Transcription machinery [BR:dya03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Dyak_GE24228
DNA repair and recombination proteins [BR:dya03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Dyak_GE24228
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR DUF4892 CpXC
Other DBs
NCBI-ProteinID: EDW97592
FlyBase: FBgn0241358
UniProt: B4PT93
LinkDB
Position
3R
AA seq 129 aa
MTTAFDAAHTEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVN
KIMHEIDELTHIVPDVISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTN
QNCTHRWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgacgactgcctttgacgccgcacacacggaggggccgggattcgtgggcattcggttc
tgccaggagtgcaacaacatgctgtaccccaaggaggacaaggagaacaaaatcctgctc
tacgcctgccggaactgcgattacaagcaggaggcggactccaactgcatctacgtcaac
aagattatgcacgaaatcgatgagctgacccacattgtgcccgacgtgatctccgatccc
acgctgccgcgaacggaagatcacgcctgccccaaatgctcccacagggaggcggtcttc
ttccaggcgcaaacccgtcgcgccgaagaggagatgcgactgtactacgtgtgcaccaac
cagaactgcacccaccgatggacggagtag

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