Dickeya zeae: W909_00200
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Entry
W909_00200 CDS
T03567
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
dzc
Dickeya zeae
Pathway
dzc00220
Arginine biosynthesis
dzc00791
Atrazine degradation
dzc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
W909_00200
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
W909_00200
Enzymes [BR:
dzc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
W909_00200
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
RnfC_N
HlyD_D23
ATP-grasp_5
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AJC64614
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All DBs
Position
complement(44382..47975)
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AA seq
1197 aa
AA seq
DB search
MFERVLIANRGAIAVRIIRTLKKMGVKAIAVYAEADRHSQHVRQADEAWSLGDGPVRDTY
LNQDKLLHIAAQCGAQAIHPGYGFLSENAGFVTRCEQAGLVFLGPTVAQMTAFGLKHQAR
ALAQQNDVPLLPGSGLLTSLDSACEQAQRIGYPVMLKSTAGGGGIGMQRCNDPAQLVDAF
TRVKRLAGNNFADDGVFLEKFIAQARHIEVQVFGDGQGNVIALGERDCSAQRRNQKVIEE
TPAPHLSDSVRAELQATAIRLCQAVNYRSAGTVEYVYDEGSKQFWFLEVNTRLQVEHGVT
ELVYGVDIVQWMVELGAGCLPPLDTLITTPRGHAIQVRLYAEDPAKQFQPCAGLLSHVDF
PNALPGLTLRIDHWLDSGSEVSPFYDPMLAKILVHGDNRDAALDGMAQALTATSLYGIET
NLDWLRHLLPLPAVRHGEIITATLGEVVWQPATLDVLSGGTLTTVQDAPGRIGYWHVGVP
PSGPFDTHSFRLGNQLLGNAPDAAGLEITLRGPTLRFNHDCAFVVTGAVIDIRLDNAALD
GGRVHHARAGQTLTLGDIQGAGCRSYLLLAGGLACPTYLGSRSTFTLGKFGGHAGRALRA
GDVLHLAAPALPMSDAVLPAPDWNTHWSLRVIYGPHGAPDYFTTQDIDTFFAADWQVHYN
SSRTGIRLIGPKPQWARSDGGEAGMHPSNIHDNAYAFGTVDFTGDMPVILGPDGPSLGGF
VCPATVIHADLWKLGQLKAGDSIRFIPVTLEQADELARAAECAIAAGLPAAEPAPVPCCP
SPVLYHRAARDERPSVTCLAAGDRFLLLEYGEHRLDIALRFRVHALMQWLEQHPLPGVQE
LTPGIRSLQIHFDSLRCPRSALLTHLQQADDALGDLRHAAVPSRTVWLPLSWDDDACREA
ITRYTQSVRPGAPWCPSNIEFIRRINGLASVEQVKEIVFNAHYLVMGLGDVYLGAPVATP
LDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRDRQTDV
FRQPWLLRFFDQIRFYPVSAQELLAIRERFPWGDYPLRIEEGEFRLADYQHMLAEQQPSI
DTFQQQRQLAFDEELARWRADGQFTFDSSLQETASDDEVIPANGYAVESQVAGSVWQWLA
APGDSVSAGQIVGILESMKMEIPITAPVAGVIHTLHRQAGHQVQAGQLLMVIEPAEH
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgtgtattgattgccaaccgtggcgctattgcggtgcgtatcatccgcacc
ctgaaaaaaatgggcgtaaaagccatcgcggtttacgccgaagcggaccgccattcgcag
catgtgcgtcaggctgatgaagcctggtcgttgggcgacggcccggtacgcgatacctac
ctgaatcaggacaaattgctgcatatcgccgctcaatgtggcgcgcaggcgatccacccc
ggttatggttttctgagtgaaaacgccggttttgtgacccgctgcgaacaagcaggcctg
gtgttcctcggcccgaccgtcgcacagatgaccgcgttcggcctcaagcatcaggcccgg
gcactggcacaacagaacgacgtccctctgctgcccggcagcggcttgctcacctcgctg
gacagcgcctgcgaacaggcacaacgtatcggttatccggtgatgttaaagagcaccgca
ggcggcggcggcatcggcatgcagcgctgcaatgaccccgcccaactggttgatgcgttt
acccgcgtcaaacgactggcaggtaacaatttcgccgacgacggcgtatttctggaaaaa
ttcatcgctcaggcccgccacatcgaagtgcaggtcttcggcgacggccagggcaacgtg
atagcccttggcgagcgcgattgctccgcccaacgccgcaaccagaaagtgattgaagaa
accccggcgccccacctgagtgacagcgtgcgcgctgaactgcaggctaccgccattcgg
ctgtgtcaggcggtcaattaccgcagtgcaggcacggtcgagtatgtgtatgacgagggc
agcaagcagttctggtttctggaggtcaacacacgcctgcaggtcgagcacggcgtcacc
gagctggtgtacggcgtcgacatcgtgcagtggatggtagaactgggtgcaggttgcctg
ccgccgcttgatacgcttatcaccacacctcgcggtcacgccattcaggtgcggttatac
gccgaagacccggccaaacagttccagccctgtgctggcttgctcagtcatgtcgatttt
ccaaacgccttgcccgggcttaccctgcgcatcgaccattggctggacagcggcagcgag
gtatcgccgttctatgacccaatgctggcgaaaatcctcgtacacggtgacaaccgggat
gccgccctcgacggtatggcacaggcgctgacggccacgtcgctgtacggcatcgaaacc
aacctcgactggctacgccacctgctgcccctgcctgcggtcagacacggagaaatcatc
accgcgactctgggtgaggttgtctggcagcccgcgacgctggatgtgctcagcggcggc
acactgacgaccgtgcaggatgcccccggccgcatcggctattggcatgtcggtgtaccg
ccttccggccccttcgatacccactcattccggcttggcaatcagttgctgggcaacgca
cccgatgccgccggactggagatcaccctgcgtgggccaaccctgcgtttcaaccatgac
tgcgcattcgtggtgaccggcgctgtcatcgacatccgactggataatgccgccctcgac
ggcggacgcgttcaccacgcccgcgccggacaaacgctcacgctcggtgatattcagggt
gccggttgccgcagctacctgttgctggcaggcggcctggcctgcccgacctacctgggc
agccgcagcaccttcacactcggcaagttcggcggccatgccggacgggccttgcgcgca
ggtgacgtactgcatctggccgcgccagcgctccccatgtcagacgccgtattgcctgcg
cctgactggaatacccactggtcgctgcgagtgatttatggcccccacggcgcaccagac
tattttaccacgcaagacatcgacacctttttcgccgctgactggcaggtgcattacaat
tccagccgcaccggtatccgactgattggtcccaaaccccagtgggcgcgaagcgacggc
ggcgaagccggtatgcacccgtccaatattcacgacaacgcctacgccttcggcaccgtc
gactttaccggcgatatgccggtgattctggggccggatgggccgtcactgggcggcttc
gtctgcccggctacggtgatccacgctgacttgtggaaactgggccagctcaaagcaggc
gacagcattcgttttattccggtcacgctggaacaggcggacgagctggcacgcgcagcg
gaatgcgccatcgccgccggtctccctgccgcagagcccgctcccgtcccctgttgcccg
tcgccggtgctgtaccaccgagcggcacgggacgagcgaccttcggtgacctgcctcgcc
gcaggcgatcgtttcctgttgctggaatacggcgagcaccggctggatatcgcgttgcgt
tttcgcgtacacgcgctgatgcagtggctggaacagcacccgctgccgggtgtgcaggaa
ctgacgccgggcattcgttcgctgcaaatccatttcgacagcctgcgctgcccacgcagc
gcgctgctgacgcacctgcaacaggcggacgacgccctcggcgacctgcggcacgccgcc
gtgccctcccgtaccgtctggctgccgctcagttgggatgacgacgcctgccgcgaagcc
atcacccgctatacccaatcggtcagacccggcgcgccctggtgccccagcaacatcgaa
ttcattcgccgcatcaacgggctggcgtcggtagagcaggtcaaagagatcgtcttcaac
gcccattatctggtgatggggttgggcgatgtctacctcggcgcacccgtcgccacccca
ctcgacccacgccaccggctggtcaccaccaagtacaacccggcccgcacctggacggcg
gaaaactcggtcggcatcggcggcgcgtatctgtgtgtatacggtatggaaggccccggc
ggctatcagttcgtgggccgcacgttacagatgtggaatcgcgatcggcaaaccgatgtc
tttcgccagccatggctgctgcgctttttcgatcagattcgcttttatccggtcagcgcg
caggagttgctggctatccgtgaacgcttcccgtggggagattatccgttgcgcattgaa
gagggggaatttcgcctcgccgactaccagcacatgctggctgaacagcaaccctctatc
gataccttccagcaacagcgacaactggccttcgacgaagagctggcacgctggcgcgcc
gacggccagttcaccttcgacagcagcctgcaagagacggccagcgatgatgaggtgatt
ccggctaacggttacgcggtggaaagtcaggtggcagggagtgtgtggcaatggcttgcc
gcccccggtgacagcgtcagcgccgggcaaatcgtcggtattctggaatcgatgaaaatg
gaaattcccattaccgcaccggtcgccggtgtcattcatacgttgcatcgtcaggcaggg
catcaggtgcaggccgggcagttactgatggtgatcgaaccggcagaacattaa
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