Dickeya zeae: W909_00985
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Entry
W909_00985 CDS
T03567
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dzc
Dickeya zeae
Pathway
dzc00071
Fatty acid degradation
dzc00280
Valine, leucine and isoleucine degradation
dzc00310
Lysine degradation
dzc00362
Benzoate degradation
dzc00380
Tryptophan metabolism
dzc00410
beta-Alanine metabolism
dzc00640
Propanoate metabolism
dzc00650
Butanoate metabolism
dzc00907
Pinene, camphor and geraniol degradation
dzc00930
Caprolactam degradation
dzc01100
Metabolic pathways
dzc01110
Biosynthesis of secondary metabolites
dzc01120
Microbial metabolism in diverse environments
dzc01200
Carbon metabolism
dzc01212
Fatty acid metabolism
Module
dzc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
W909_00985 (fadB)
00650 Butanoate metabolism
W909_00985 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
W909_00985 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
W909_00985 (fadB)
00310 Lysine degradation
W909_00985 (fadB)
00380 Tryptophan metabolism
W909_00985 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
W909_00985 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
W909_00985 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
W909_00985 (fadB)
00930 Caprolactam degradation
W909_00985 (fadB)
Enzymes [BR:
dzc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
W909_00985 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
W909_00985 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
W909_00985 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
W909_00985 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
AlaDh_PNT_C
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AJC64763
LinkDB
All DBs
Position
complement(215292..217481)
Genome browser
AA seq
729 aa
AA seq
DB search
MIYQGDTLYLNWLEDGIAELVFAAPGNVNKLDTRTVASLGEALNHLKEHPSLRALLLRSD
KPAFIAGADITEFLSLFAAPPETLHQWLTDANAIFSQLEDLPVPTLSAINGYALGGGCEC
VLATDFRLATPDVRIGLPEVKLGIMPGFGGTVRLPRLLGADSALEIITAGKDLPADEALK
VGLIDAVTSNDKLLSSALHMLRLAAEDKLDWRARRRQKQAPLRLNRIEATMSFATASALV
QQAAGPHYPAPMTALKTIEAAARLDRDAALKLETDNFVTLTQTTAAYALVGVFLNEQAVK
STAKKWAGDASPPARVAVLGAGIMGGGIACQSARKGVPVWMKDINEKALTLGMEEAAKLL
NAQLQRGKLDALSMMGILARIHPTLNNNGLEQADLVIEAVVENPQIKARVLADVETCVSE
QTLIVSNTSTIPIGQLATALQRPQNFCGMHFFNPVHRMPLVEVIRGPQTDEKTLARVVAY
ATKIGKTPIVVNDCPGFFVNRVLFPYIAAFCLLLRDGADFRDVDAVMEKQFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMAKTYRDAVDVLVEHQRLGQKSGAGFYRYSPDAKGKP
RREQDDQTDILLDAACGPKRTFSAQEITHRLMVPMLNEVARCLEEGIVATPAEADMALLY
GLGFPPFHGGACRYLDTLGSQHYVDIAQSLASLGPLYTIPESLLRMAKFQQRYYPAVEPH
ADLSLHQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcgacacgctgtacctcaactggctggaagacggcattgccgaactg
gtttttgctgcgcctggcaacgtcaataaactggacacccgtacggtggccagtcttggc
gaagccctgaatcacctgaaagaacacccttcgctccgcgccctgctactgcgttcggac
aaacccgcgtttattgccggagcggacatcaccgaatttttatcgttgttcgctgcaccg
ccagaaacccttcatcagtggctgaccgacgccaacgccattttcagccaactggaagac
ttgccggtgccgacactctccgccatcaacggttatgcgctgggcggaggatgcgaatgt
gtgctggcgaccgatttccgcctggcgacacccgacgttcgcattggcctgccggaagtg
aaactggggatcatgccgggatttggcggcacagttaggttaccgcgactgctgggcgcc
gacagcgcgctggaaatcattaccgccggtaaagacctccctgccgacgaggccctgaaa
gttgggttgatcgatgcggttaccagcaacgataagctgctgtcgtcagcgttgcatatg
ttgcgtctggcggcggaggataaacttgactggcgagcccgtcgccgccagaaacaagcg
ccgctaaggcttaaccgcatcgaggcaaccatgagttttgccaccgccagcgcactggtg
cagcaagctgccggtcctcactaccctgcgccaatgacagcgctcaaaaccattgaagct
gccgccagattagatcgtgacgccgcgctgaaactggaaaccgacaatttcgttacgctg
acgcaaaccacagcggcgtacgcgttggtcggtgtcttcctgaacgaacaagcggtaaaa
agcacggccaaaaaatgggctggcgacgcttcgccaccagcacgcgttgcggtactcggt
gccgggatcatgggtggcggtattgcctgtcagtcggcacgtaaaggcgtgccggtatgg
atgaaagatatcaacgagaaagcgctgacgctggggatggaagaggcagccaaactactg
aatgcacagctacagcgcggcaagctggatgccctgagcatgatgggcatactggctcgt
atccacccgacattgaataacaatgggctggagcaggctgacctggttatcgaagcggtg
gtggaaaacccacaaataaaggccagggtactggccgatgtcgagacctgcgtcagtgag
cagacgttgatcgtttccaatacctcgaccattcctatcgggcagttggccaccgccttg
caacgaccgcaaaatttctgcggcatgcattttttcaatccggtacaccggatgccgttg
gtagaagtgattcgcggcccccagaccgatgagaaaacgctggctcgcgtagtcgcttac
gccaccaaaatagggaaaaccccgattgtagtgaatgactgccccggatttttcgtcaac
cgtgtgctgttcccttatatcgccgcgttctgtctgctattgcgtgacggtgcggatttc
cgcgatgttgatgccgtgatggaaaaacagttcggctggccgatgggaccggcttacctg
ctggacgtggtcgggctggataccgcccaccatgctcaggcggtaatgtcggcaggtttt
ccgcagcgcatggcaaaaacctaccgcgacgcggtcgatgttctggtggaacaccagcgt
ttgggtcagaaaagcggtgctggcttctaccgttacagtccggatgcgaaaggcaaacca
cgccgggaacaagacgaccagaccgatattctgctggatgccgcctgcgggccgaagcgg
accttcagcgcacaagagatcacgcatcgcctgatggtaccaatgctcaacgaagtcgca
cgttgtctggaagaggggatcgtcgccacaccggcggaagccgatatggcactgctttac
ggactgggtttcccgccgttccatggcggtgcctgccgttatctggacactctgggtagc
cagcactacgtggacattgcccaatcgctagcgtcgctggggccgctttacaccataccg
gaaagcctgttgcggatggctaagttccagcagcgctattacccggcggttgaacctcac
gctgacctgtctctccaccaaccggcataa
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