Duganella zoogloeoides: SR858_26255
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Entry
SR858_26255 CDS
T09628
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzo03009
]
SR858_26255 (rsmD)
Enzymes [BR:
dzo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SR858_26255 (rsmD)
Ribosome biogenesis [BR:
dzo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SR858_26255 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
MethyltransfD12
RsmJ
Methyltransf_24
Methyltrans_SAM
Methyltransf_4
PrmA
RrnaAD
Methyltransf_32
Methyltransf_11
Methyltransf_16
Methyltransf_12
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
WQH04497
LinkDB
All DBs
Position
complement(5972019..5972675)
Genome browser
AA seq
218 aa
AA seq
DB search
MPKKPVKSPAKAAKVPVHGPQHSNQVRIIGGLWKRTPLPVLAAQGLRPTPDRVRETVFNW
INHQRDANWADAQVLDLYAGSGALGFEAASRGAQSVTMVDMATPVVRQLEDIKAKLKADN
VQILRGDALVVAQAAAARGQKYDLIFLDPPYQQEFLERNLPLCVRLLKEGGLVYAESGAA
LAWPDGDTPDWMAGWEVIRADKAGMVFYHLLQARPAVA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaagcccgtcaaatcgccagcaaaagcagccaaagtcccggtccacggtccc
cagcacagcaaccaggtgcgcatcatcggcgggctgtggaagcgcaccccgctgccggtc
ctggccgcgcaaggcctgcgccccacccccgaccgcgtgcgcgaaacggtctttaactgg
atcaaccaccagcgcgacgccaactgggccgacgcccaggtgctcgacctgtatgccggc
agcggcgcgctcggctttgaagcggccagccgtggcgcgcaatcggtgaccatggtggac
atggccacgccagtcgtgcgccagctcgaagacatcaaggccaaactgaaggcggacaat
gtgcagatcctgcgcggcgacgcgctggtggtggcgcaagcggccgccgcccgtggccag
aaatacgacctgatcttcctcgacccgccataccagcaggaatttctcgagcgcaacctg
ccgctgtgcgtgcgcctgctcaaggagggcggcctggtgtacgcggaatcgggcgcggcg
ctggcctggcccgacggcgacacgccggactggatggcgggctgggaagtgatccgcgcc
gacaaggcgggcatggtgttttaccacttgctgcaagccaggccggctgtggcgtag
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