Eurytemora affinis: 111708868
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Entry
111708868 CDS
T07296
Name
(RefSeq) uncharacterized protein LOC111708868 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03020
RNA polymerase
eaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111708868
09124 Replication and repair
03420 Nucleotide excision repair
111708868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111708868
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111708868
Enzymes [BR:
eaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111708868
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111708868
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111708868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kazal_2
Kazal_1
GDPD
CFAI_KAZAL
GDPD_2
Motif
Other DBs
NCBI-GeneID:
111708868
NCBI-ProteinID:
XP_023338176
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MVTKRYLAALGIIILSVLGVLIVSYLEIINMDRYLIEEEVCGVESCFVQLGSRCLRCTNP
KLPRKVQKRSLTSVQPLPPTVIDQQGCQMLTHCLKQCNHGLENICSETEKRAASPPIFLD
DDEPMCEDDRPRILGHAGGDPVRACENTVEATRAGLEAGMEAVHIDISISKDKIPFLWRD
HDPRSLTSRLRQMGSYGVMGCRPAFNLQSVVPAHQLTWEKIQSDWFYVNTTTNLRNHNNT
IVNFQDWVKGVGVDLKRIEKVWLEFRMPREFLYSSILEVWRLATTAGIQHKLFFKLNQYG
KVVFDQPITLVGGIEVSIQKLSLSERNSIVYFLKEIEKGDARGDVFILNSEDEAVYTLLS
ENNSSSVSALYKELKAKVDPSNLDLKGINFEVKTMDSLVENVRNVINSRDKLTRDNCNPS
YTQVAAWTVNNREIAHQLVCLHIDYIITDYPERVDRFADCALRLKQDNCPAFCGRIYLPV
CGSDGTTYSNECMMRFHACETKEIITLVHNGRCQEQLNTSLIRQRVGNPVYEKSEGNPGN
FLVPNNKEEVARRSAAALLKPAGEKTTFAENTRGVDQTKTTYIHDKEFATNTYKDLDLDT
ELLCDFSFCRGEQGYNPVCGKNGLTYDNQCSLLQTKCYGEQVHLDYEGSCKTTPCTENCS
EMELPVCGTDRLTYRNTCCLERASCLDKDDKGDEIHVWHRGVCGDCTFICTREFRPVCGS
NNKSYANLCTMEEQTCRDNTPVWWMHEGRCKGDSNKSENLPENTGNSYIKPITQSTENYQ
PISQSYNSATHAPSFKPFPPPLQSNPPGYQSPPLALPSQPNQPQDQPSPPPSQSNPPGYK
PSPPPLQSNTLGYKPSPPPSQPNLLGYQPSPSPSQSNSPGYKPSPQIMHPIPNSSGNLPL
SPSNQPLIPGYQPPIPSYQTTSSNNQLSPSSYQPTPINNQPSHSYQQTHSNYQQPASFQS
IPSNNQPSSSSLKPNPINNQPSTSHQSSPSYQPNQSNIQPLSSNQPTPSNNKPSSLSYQP
NPSINQPKPPSYQPNPPSHQANLPSFHQFPQPYTTTRVPGHSNTDNMKTVEKKYLQPIRP
EVEEKDDIFDEFLDNFNSIID
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggttactaagcgataccttgcagctttaggaattataattctatctgtacttggagta
ttgatcgtcagttacctggagataataaacatggacaggtatcttatagaagaagaggtt
tgtggagtagaatcatgctttgttcagctagggagtagatgtctgaggtgcacaaatcct
aaactacctcggaaagtacagaaaagatctcttacatctgtgcaacctttaccaccaact
gtaatagatcaacaagggtgtcagatgttaactcattgtctaaagcagtgtaatcacggg
ctggaaaatatatgcagtgaaactgaaaaacgagcagcgagtcctccaatattcttggat
gatgatgagccgatgtgtgaagatgaccgtccccgtattctcgggcatgctggaggagat
cctgtccgggcatgcgagaacacggtagaggccaccagggcaggtcttgaggctggtatg
gaggctgttcatattgatatctcaatatccaaggacaagattccgttcctttggagagat
catgatccaaggtctttaacttcacgtctccgtcagatgggaagttatggtgtgatgggc
tgcagaccagcattcaatcttcaatccgtagttccagcccatcagcttacctgggaaaaa
atacagtctgattggttctatgtgaatactaccacaaatctacgtaatcacaacaatact
atcgtcaatttccaggattgggttaagggggtaggggttgacctgaagaggatagaaaag
gtttggttggagtttagaatgccaagagagttcctgtattcctccatccttgaagtctgg
agactggcaactactgcaggaattcagcacaaacttttctttaaactcaatcaatatgga
aaggtcgtgttcgatcaacctatcactctggtgggaggaatagaagtttcaatccaaaag
ctttcattgtccgaaagaaattctatcgtgtactttctaaaggagatagaaaagggggat
gccaggggagatgtttttattttaaacagtgaggatgaagctgtttacactcttctatct
gaaaataattcttcctcagtctccgctctatataaagagctgaaagctaaagttgatcct
tcaaaccttgatctgaaagggataaactttgaagtaaaaacaatggattccttagttgaa
aatgtgaggaatgtaattaattctcgtgataaattaaccagggataattgtaatccttcc
tacactcaggttgccgcctggacggtgaataaccgtgagattgctcatcagctggtttgt
cttcacatagattatataatcacagattatccagaacgggttgaccggtttgctgattgt
gccttgaggttaaaacaagacaactgtccagcgttctgtggccggatatatttacctgtg
tgtgggtctgatggcactacttatagtaatgagtgtatgatgagatttcatgcttgtgag
acaaaagagataattactttggtgcataatggcaggtgtcaagaacaactaaatacaagt
ttgatcagacaacgagtagggaaccctgtttatgaaaaatctgaaggaaaccctggaaat
tttttagtccctaataataaagaagaagtcgcgagaagatcagctgctgcattgttgaaa
cctgcaggagagaagacgacatttgcagagaacacccgaggagtagaccaaactaagacg
acatatattcatgataaagagttcgcaaccaatacttataaagatttagatttagatact
gaacttctctgtgatttctccttttgtcgaggggaacagggctataatccagtttgtggg
aagaatggattaacctatgataatcagtgttctcttctacaaacaaaatgttatggagaa
caagtacatctggattatgaagggtcttgtaaaactactccttgtactgagaactgtagt
gagatggagttaccagtttgtgggacagataggttgacctacagaaacacctgctgctta
gagcgagctagctgtcttgataaagatgataaaggagatgaaatacacgtctggcataga
ggggtctgtggggattgtacttttatttgtacaagggagttccgtcctgtttgtgggtct
aacaataaaagctacgccaacctatgtacaatggaggaacaaacttgtcgagacaatact
ccagtttggtggatgcatgaaggtagatgcaaaggtgactcaaataaatctgaaaatcta
ccagaaaatactgggaactcgtatattaaaccaatcacccaatcaaccgaaaactatcaa
cctatctcccaatcctacaattctgctactcatgcgccatcttttaaaccattcccccca
cccttgcaatccaacccacctggataccaatcacctcccctggctctaccctcacagccc
aaccaaccccaagatcaaccatctccaccaccctctcaatccaatccaccgggatataaa
ccatctcccccacccttgcaatccaacacacttggatacaaaccatctcccccaccctct
caacccaacctacttggatatcaaccatccccttcaccctctcaatctaattcacccgga
tataaaccatctcctcaaatcatgcatcctattcctaactcatccggaaacctaccatta
tccccatccaatcaacctttaatacccggatatcaaccaccgatcccctcctatcaaaca
acctcttcaaacaatcaattatcaccttcatcatatcaaccaaccccaatcaataatcaa
ccatctcactcatatcaacaaacccattctaactatcaacaacctgcctcatttcaatca
atcccatcaaataatcaaccatcatcttcctccttaaaaccaaacccaatcaataatcaa
ccatcaacctcacaccaatcatcaccctcgtatcaaccaaaccaatccaacattcaacca
ttatcttcaaatcaaccaaccccttccaataataaaccatcatctctctcatatcaacca
aacccatccattaatcaaccgaaacccccctcatatcaaccaaatcccccctctcatcaa
gcaaaccttccatccttccatcagtttccccaaccctatacaactactagggttcctgga
cactccaatacagataatatgaaaacagtcgagaagaaatatctccagcctatccgacca
gaagtcgaagagaaagacgacatttttgatgagtttctggataatttcaactctattatc
gattga
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