Equus asinus (ass): 106838552
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Entry
106838552 CDS
T04645
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
eai
Equus asinus (ass)
Pathway
eai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106838552 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eai03021
]
106838552 (POLR1B)
Enzymes [BR:
eai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106838552 (POLR1B)
Transcription machinery [BR:
eai03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106838552 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
106838552
NCBI-ProteinID:
XP_014708220
LinkDB
All DBs
Position
6:complement(77534151..77564785)
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPDGRWRNLPSGPTLKHLTDPLYGIPQEQQKPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGSICKDLSIYPAECRGRRSTYRGKLTADISW
SVNGIPKGIIKQFLGYVPIMVKSKLCNLYSLPPRALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIALTRPKWKTRGPGYTQYGVSMHCVRDEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVTEEGCSTQKQV
LNYLGERFRVKLNLPDWYPDAQAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTDVSINTDNLMKIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTATCEVVTQFAYTASVPALLCSLGVT
PVDGALHRPYSECYPVLLDGVMVGWVDKELAPSIADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGREELIGTMEQIFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYRDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRIVQKLDNDGLPFIGAQLQYGDPYYSYLNLNTGESFVMY
YKSKENCIVDNIKVCSNDTGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRTDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacggccggtggcggaacctgcccagcgggcctaccctgaagcatttgacg
gaccccttgtatgggatcccgcaggagcagcaaaagccagcgttgcaggagctgacgcgg
gctcatgtcgagtctttcaactacgctgtgcgcgaggggctgagccacgcggtgcaggct
ataccaccctttgaatttgctttcaaagatgagcgtatctctcttactattgtggatgct
gtcatcagtccacccaccgttccaaaggggagcatctgcaaagatctcagcatttatcca
gcagaatgccgtggccgaaggagtacctaccggggaaagttgacagctgatatcagctgg
tcagtgaatggaatcccaaaaggcatcattaagcagtttcttggctatgttcccatcatg
gtgaagtctaagctttgcaacttatacagccttcctcccagagccctcatcgagcaccac
gaagaagcagaggaaatgggaggctattttatcatcaatggcattgaaaaagtcatccga
atgttgatcatgcctcggagaaatttccccattgcattgacaagaccaaaatggaaaacc
agagggcctggctatactcagtatggagtttcaatgcactgtgtgagggacgaacattct
gctgtcaacatgaaccttcactacttggaaaatggcacagttatgttgaactttatttac
cggaaagaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaagaggatgactctttcttcaggaac
tctgtttcccagatgttaaggattgtaacagaagagggttgttccacacaaaaacaggtc
cttaactatctaggtgaacgcttcagagtaaaactcaaccttcctgactggtatccggat
gcacaggctgcggagtttctgtttaaccagtgcatttgtatccacttgaaatccaatact
gaaaagttttatgtactttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttagtgaatcaagaggtcctcacacccggtcagctc
ttcctcatgtttctcaaggaaaaaatggaagcttggttagtatctattaaaatagctcta
gacaagaaggctcagaagaccgatgtgtccataaacactgacaatttgatgaagattttt
aatctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tctaaaacaggtcttggcttcctgcaagattctggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggcagattttgccaag
atgaggaccaccacagtacgcaggctgctgccggagtcctggggtttcctttgtcctgtg
cacaccccagacggggagccctgtggtctgatgaaccacctaactgccacatgtgaggtc
gtcacgcagtttgcgtatacagcatctgttccagccttgctctgcagcttgggggtcact
ccagttgatggggcgctgcaccgaccgtacagtgagtgctaccctgtcctgctggatggc
gtcatggtgggctgggtggacaaggagctcgctcccagcattgcggattctctccgacat
tttaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctcatccccatg
acaggaaaaccaagtctgtacccaggattgttccttttcaccaccccgtgtagactggta
cggcctgtgcagaacttggagttgggcagagaagagctaattggaaccatggaacagatc
ttcatgaacattgctatcttcgaggatgaggtttttgctggagttaccacccaccaggaa
ctcttccctcacagcctgctgagtgtgattgccaacttcatccctttctccgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
cttacttatcgagaccgatcagataataaactgtatcgtcttcagactccacaaagccct
ttagtgagaccatacatgtatgattattatgacatggataactatccaattgggacgaat
gctattgttgctgttatttcctacactggctatgatatggaagatgccatgattgtaaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgagttcatagat
ctctctgaaaaaattaaacaaggagatgacagtctggtgtttggagtcaaacctggtgac
ccacggattgtgcagaagttagacaatgatggcttgccatttattggagcacaactgcag
tatggagatccgtattacagctacctgaacctcaacactggagagagctttgtgatgtac
tacaagagtaaagaaaattgtattgtggataacatcaaagtgtgcagtaatgacactgga
agtggaaaattcaagtgtatttgcatcacaatgagagtccctcggaacccaaccattgga
gataaatttgccagtcgtcatgggcaaaaaggcatcttgagcagattgtggccagctgag
gacatgccctttactgagagtgggatggtcccagacattctcttcaatcctcatggtttt
ccatcccgaatgaccattggtatgttaatcgagagtatggcagggaagtctgcagctttg
catggtctctgccatgatgctacacccttcatcttttcagaggagaactcggccttagaa
tactttggtgagatgttaaaggctgctggctacaacttctatggcaccgagaggttgtat
agtggcatcagtggggtagaactggaagcagacattttcataggtgtggtttattatcaa
cgcctgcgccacatggtctcagacaaattccaggttagaacaacaggagccagagacaaa
gtcactaaccagcctattgggggaagaaatgtccagggtggaatccgttttggggaaatg
gaacgggatgctcttttagctcatggtacctcttttctccttcatgaccgcctcttcaac
tgttctgatcgatcggtagcccacgtgtgtgtgaagtgtggtagtttactgtctcctctg
ttggagaagccacccccttcgtggtctgccatgcgcaacagaaaatacaactgtactctg
tgtaatcgcactgacactatcgacactgtttctgtgccttacgtttttcggtattttgta
gctgagctggcagctatgaacatcaaagtgaaactggatgtcatttaa
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