Equus asinus (ass): 106847303
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Entry
106847303 CDS
T04645
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eai03016
]
106847303 (CDKAL1)
Enzymes [BR:
eai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106847303 (CDKAL1)
Transfer RNA biogenesis [BR:
eai03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106847303 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-GeneID:
106847303
NCBI-ProteinID:
XP_044632933
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Position
8:96688150..97296765
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AA seq
561 aa
AA seq
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MLDHNRGKYSRCQHICPSRLIFQEDLRPIADNQEKMPSASCETLLDDIEDIVSQEDSKPQ
HRHFARKQVVPKVRKRNTQKYLQEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQ
LAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKRREENWGRVEFHLSQHLTTKIY
EKKKSPPQSKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHS
VRLLGQKKDNGKRLGGAPLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPI
DELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTSLPALLWKLVEVIPEGAMLRLGMTNP
PYILEHLEEMAKILNHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKEKVPG
ITIATDIICGFPGETNQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQ
RTKDLSRVFHSYNPYDHKEFRSRLGNHLTSTSRPSATIRRGSASSRMVLRLQRLHQDCAL
RMSVGLALFALLCAFFVKVYN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcacaatcgtggcaaatatagcagatgtcaacacatctgtcctagtcgactc
atctttcaagaggatttgagaccaattgcagataatcaagagaagatgccttctgcatca
tgtgagacactgctggatgacatagaagatattgtgtcacaggaagattcaaagccacag
catcggcattttgcaagaaagcaggttgttccaaaggtgcgaaagcgaaatacccagaaa
tatttgcaagaggaaaacagtccaccaagtgatagcactattccaggcatccagaaaatt
tggatacgaacatggggttgttctcataataattcagatggagaatatatggctggacaa
ctagctgcttatggatataaaattacagaaaatgcttcagacgcagatttatggctcctg
aatagctgtactgtaaaaaacccagctgaagaccactttagaaactcaattaagaggaga
gaggagaactggggaagagttgagtttcatttgtctcagcatctcactactaaaatatat
gaaaaaaaaaaatccccacctcagtcaaaagctcaagaggaaaataagaaaatagtgcta
gctggatgcgttcctcaagcccagcctcgtcaagactaccttaaaggactgagtatcata
ggggttcaacagatagatcgagtggtagaagtggtggaggaaacaattaaaggtcactct
gtgagattgctgggtcagaaaaaggataatggaaaacggttggggggagcgccattggat
ttgccaaagattaggaagaatccactgatagaaatcatttccatcaacactgggtgtctc
aacgcttgtacctactgcaaaactaaacatgccagaggaaatttggccagttatccaatt
gatgaactagtagatagagccaaacagtctttccaagagggtgtttgtgagatatggttg
accagtgaagacacaggggcttatggcagagatattggcaccagtctccctgcactgctg
tggaaactggttgaagtgattcctgagggagcaatgctgaggcttggcatgacaaatccg
ccttatattttagagcatctggaggaaatggcaaaaatccttaatcatcccagagtctat
gcttttctgcacataccagtccagtcggcctctgacactgtgctcatggaaatgaaaaga
gaatactgtgtggctgacttcaaaagagtagtggattttctgaaagagaaagttcctgga
ataactattgctacagatattatctgtggttttcctggagaaacaaatcaagattttcaa
gaaacagtgaaacttgttgaagagtacaaatttccaagcctctttattaatcagttttac
ccaagaccaggaactcctgctgcaaaaatggaacaagttccagcacaagtgaaaaagcaa
agaacaaaagatctttctcgagtatttcattcttacaatccatatgatcacaaggaattc
agaagtaggcttggaaatcacctgacttcaacatcccgcccctctgctacgattcggcga
ggctcggcgagttccagaatggtgctacgattgcaaaggctgcatcaagactgtgcactg
aggatgtctgtgggcctggctctgtttgcccttctttgtgctttttttgtcaaggtctat
aattaa
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