Equus asinus (ass): 106848628
Help
Entry
106848628 CDS
T04645
Symbol
TPR
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
eai
Equus asinus (ass)
Pathway
eai03013
Nucleocytoplasmic transport
eai05014
Amyotrophic lateral sclerosis
eai05200
Pathways in cancer
eai05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106848628 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106848628 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
106848628 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
106848628 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106848628 (TPR)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106848628 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Uso1_p115_C
Baculo_PEP_C
DUF5082
DUF1192
Imm70
Motif
Other DBs
NCBI-GeneID:
106848628
NCBI-ProteinID:
XP_014724119
LinkDB
All DBs
Position
25:26915740..26971411
Genome browser
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRQRGRPMASRSFDGSRRGSLRRAGAREPVSEATEAAAQASGSSWSSPFFS
VSAPSAAAAAAPGPSDMAAVLQQVLERAELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQNLRLELEKLNNQLKALTEKNKELEVAQD
RNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNATKGDLQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEKSKEQMEKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKINELQLKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQITGVNIPLQASSLDDISLVSTPKR
SSTSQTVSTPAPVPVIESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKFQEQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGASEKLAVAEVRADNLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSNQIEKLENEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRSGKGQPNSKEDVDDLLSQLRQT
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLTNVQSEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEGVQGPLNI
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNV
EREKVQVTAKTMAQHEELMKKTETMNIVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKESIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKAMETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKSKSLENQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEDDDDDNDGEHED
YEEDEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GESNQRAADSQNSGEGNTGTAESSFSQEIAREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagccgccaaagaggacgccccatggcatcccgg
agctttgacgggtcccgtcgcgggagtctccggcgggcaggcgcgcgcgagcccgtgagc
gaggcgacagaggcggccgcccaggcctctgggtcctcctggtcttcgcctttcttctcg
gtttctgctccgtcggccgctgccgccgcggcccccggccccagcgacatggcggcggtg
ttgcagcaagtgctggagcgcgcggaactgaacaagctgccgaagtccgtccagaacaaa
ctcgagaagttccttgctgaccagcagtccgagatcgatggcctcaaggggcggcacgag
aagtttaaggtagagagcgaacaacagtactttgagatagagaagaggctgtcccacagt
caggagagacttgtgaatgagacccgggagtgccaaaacttgcggcttgagctggagaag
ctcaacaatcaactgaaggcactaactgagaaaaacaaagaacttgaagttgctcaggat
cgcaatattgccattcagagccagtttacaaggacaaaggaagaattggaagctgagaaa
agagacttaattagaaccaatgagagactctctcaagaacttgaatatttaacagaggat
gttaaacgtctaaatgaaaaacttaaagaaagcaatgcaacaaagggcgatcttcagtta
aaactggatgagcttcaagcttctgatgtttctgttaagtatcgagaaaaacgcttagag
caagaaaaggagttgttacataatcagaatacatggctgaatacagagttgaaaactaaa
actgatgaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcttgaaa
acgtcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaggccagtatggaggagaaattccacaatgaattaaatgctcacataaaa
ctctctaacctgtacaagagtgctgctgatgactcagaggcaaagagcaatgaactgacc
agagcagtcgatgaactacacaagcttttgaaagaagctggagaagccaataaagcaata
caagatcatcttctagaggtggagaaatctaaagagcaaatggaaaaagaaatgctagag
aaaatagggaaattggagaaggaattagagaatgcaaatgacctactttctgccacaaaa
cgtaaaggagccatattatctgaagaagagcttgcagccatgtctcctactgcagcagcc
gtagctaagatagtgaaacctggcatgaaattaactgagctgtataatgcttatgtggaa
actcaggatcagttgctgttggagaaactagaaaacaaaagaattaataagtatctggat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagcgtgaggagtat
gagcgtgcacaaaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacactgataaagccaacaaacattcatctgtgctcgaaaga
gacaatcaaagaatggaaatacaaataaaagatctttcacaacagattagggtgcttctg
atggaacttgaagaagcaaggggtaaccatgtaattcgtgatgaggaagtaagctctgct
gatataagtagctcatctgaagtgatatcacagcatctagtatcttacagaaatattgaa
gagcttcaacaacaaaatcaacgtctcttagtggctctcagggaactaggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatcaatgagcttcagctcaaacttgag
aatgccctcactgaattggagcaactccgtgagtcacgacaacatcagatgcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttattgtcacaaataacaggagtt
aacattcctttacaagcttccagtttagatgatatttctcttgtgtcaacgccaaaacgt
tcaagtacatcacagactgtttctactcctgccccggtacctgtaatcgagtcagcagag
gctatagaagccaaggctgcccttaaacagttgcaggaaatttttgagaactacaaaaaa
gaaaaggcggataatgaaaaaatacaaaatgagcagcttgagaaatttcaggagcaagtt
acagatttgcgatcgcaaaacaccaaaatttctacccagctagattttgcttctaaacgt
tatgaaatgttacaagataatgttgaaggatatcgtcgagaaataacatccctacatgag
agaaaccagaaactcactgcaacaactcaaaagcaggagcagatcataaatacgatgaca
caagatttgagaggagcaagtgaaaagctagctgttgcagaagtaagagcggataatttg
aaaaaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcaacagagagaatct
ttgttagctgaacaaagagggcaaaatttgctgctaactaatctgcaaacaattcagggg
atattagagcgatctgaaacagaaaccaaacaaaggctaagtaaccagattgaaaaactg
gaaaatgaaatatctcatctaaagaagaagttggaaaatgaggtggaacagaggcacaca
cttactagaaatctagatgttcaactgttagatacaaagagacaactggacactgagaca
aatcttcatcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgctacattg
aaacagcacctcagtaatatggaagtacagcttgcttctcagtcctcacagagatctggt
aaaggtcagcctaacagcaaagaagatgtggatgatcttctgagtcagctaaggcagaca
gaagagcaggtgaatgatttaaaggagagactcaaaacaagtactagtaatgtggaacag
tatcgagcaatggttactagtttagaagaatccctcaacaaggaaaaacaggtgacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacagttg
gaaaagaagttgatggaagtagagaaggaaaaacaggaacttcaggatgataagagaaaa
gccatagagagcatggaacaacagttatctgagttaaagaaaacacttactaatgttcag
agtgaagtacaggaagctcttcagagagcaagcacagctttgagtaacgagcagcaagcc
agacgtgactgtcaggaacaggctaaaatagctgtggaagctcagaataagtatgagaga
gaattgatgctacatgctgctgatgttgaagctctacaagccgccaaggaacaggtttcc
aaaatggcatcagtccgtcagcatttagaagaaacaacccagaaagcagaatcacagttg
ttggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggatgaagtttccaag
tgtgtgtctcgctgtgaagatctagaaaaacaaaacagattacttcatgatcagattgaa
aaattaagtgacaaagtcgttgcctctatgaaggagggtgtgcaaggtcccttgaatatc
tctctcagtgaagaaggaaaatcccaagaacaaattttagaaattctcagatttatacga
cgagaaaaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctgcgttat
cgacaaagggttgaacttttagaaagagagctgcaggaactgcaggatagtctaaatgtg
gaaagggagaaagtccaggtaactgcgaaaacaatggcccagcatgaagaactgatgaag
aaaactgaaacaatgaacatagttatggagaccaataagatgctaagagaagaaaaggag
aggctagaacaggatctacagcagatgcaagcaaaggtgaggaaactggagttagatatt
ttacccttacaagaagccaatgctgagctgagtgaaaaaagcggtatgttacaagcagag
aagaagttactagaagaagatgtcaaacgctggaaagcacgtaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaaacgtattcaacagttgactgaagaaattgggagacttaaagctgaaattgcaaga
tcaaatgcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaat
aaagtaagaactgaaaaggaaagcatccagaaggacttagatgccaaaataattgacatc
caagaaaaagtcaaaactattactcaagtcaagaaaattggacgtaggtacaagactcaa
tatgaagaacttaaagcacagcaggataaggcaatggagacctcagctcagtcttctggc
gaccatcaggaacagcatgtctcagtccaagaaatgcaggagctcaaagaaacccttaac
caagctgaaacaaagtcaaaatcactcgagaatcaagtagagaatttacaaaagacgtta
tctgaaaaagagacagaagcaagaaatctccaggaacagactgtgcagcttcaatccgaa
ctttcacgacttcgtcaggatcttcaagatagaaccacgcaggaggagcagctccgacag
cagataactgaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaatt
gcacatttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcaacagaaagatgaattagatgttcgtatgactgctcttaagtcc
caatatgaaggtcgaattagtcgcttggaaagagaactaagggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaacaaggtcccagaacagcagagacag
atcacattgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagaccca
ccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaagtgaccgctgcg
gctatggctgggaataagtcaacacccagggctagtatccgcccaatggttacacctgca
acagttacaaatcctactactaccccaacagctacggtgatgcccactacacaagtggaa
tcacaagaagctatgcaatcagaagggcctgtggaacatgttccagtgtttggaagcaca
agtggatctgttcgttctaccagtcctaacgtccaaccttctatccctcaacccatttta
actgttcagcaacaaacacaggctacggcttttgtgcaacccactcaacagagtcatcct
cagattgagcctgcaaatcaagagctatccccaaacatagtagaagtggttcagagttcg
ccagttgagcggccttccacttccacagcagtatttggcactgtttcagctaccccaagt
tcttctctgccaaaacgtacgcgtgaagaggaagaggatagcaccatagaagcgtcggac
caggtctctgatgatacagtggaaatgcctcttccaaagaaattgaaaagtgttacgcct
gttggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaa
gtatacaaccaagattctcaggattccattggagaaggagtcacccagggagattatact
ccaatggaagacagtgaagaaacctcccaatctctacaaatagaccttggaccccttcaa
tcagatcagcaaaccacaacttcatcccaagatggtcaaggcaaaggagatgatgtcatt
gtaatcgacagtgatgatgaagaagatgatgatgatgacaatgatggagagcatgaggat
tatgaagaagatgaagaagaagatgatgatgatgaagatgacacagggatgggagatgag
ggtgaagatagtaatgaaggcactggtagtgcagatggcaatgatggatatgaagctgat
gatgctgagggcggtgatgggactgatccaggtacagagacagaagaaagtatgggtgga
ggtgaaagtaatcagagagctgctgattcccaaaacagtggtgaaggaaatacaggtact
gcagagtcatctttttcccaggagattgctagagaacaacagccatcatcagcatctgaa
agacagacccctcgagcacctcagtcaccgagacgcccaccacacccacttcccccaaga
ctgaccattcatgctccacctcaagagttgggaccaccagttcagagaattcagatgact
cggaggcagtctgtaggacgtgggcttcagttgactccaggaataggtggcatgcagcag
catttttttgatgatgaagacagaacagttccaagtaccccaactcttgtggtgccacat
cgtactgatggatttgctgaggcaattcattccccacaagttgctggtgttcctagattc
cggtttgggccacctgaagatatgccacaaacaagttcaagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagctcatgaagaa
gagtccggtggccgaagtgttcccactactcctctacaagtagcagccccagtaaccgta
tttactgagagtaccacctctgatgcttcagagcatgcctctcagtctgttccaatggtg
acaacgtccactggcactttatccacaacaaatgaaacagcaacaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccagcaggaagaagaacctgttcaggcatctgatgagtcagaccttccttccaccagc
caggatcctccttctagttcttctgtagatactagcagtagtcaaccaaagcctttcaga
cgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcaatttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaacattaattaa
DBGET
integrated database retrieval system
