Erwinia amylovora ATCC 49946: EAM_0213
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Entry
EAM_0213 CDS
T01199
Symbol
fadB
Name
(GenBank) fatty oxidation complex subunit alpha [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3 hydroxybutyryl-CoA epimerase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay00071
Fatty acid degradation
eay00280
Valine, leucine and isoleucine degradation
eay00310
Lysine degradation
eay00362
Benzoate degradation
eay00380
Tryptophan metabolism
eay00410
beta-Alanine metabolism
eay00640
Propanoate metabolism
eay00650
Butanoate metabolism
eay00907
Pinene, camphor and geraniol degradation
eay00930
Caprolactam degradation
eay01100
Metabolic pathways
eay01110
Biosynthesis of secondary metabolites
eay01120
Microbial metabolism in diverse environments
eay01200
Carbon metabolism
eay01212
Fatty acid metabolism
Module
eay_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EAM_0213 (fadB)
00650 Butanoate metabolism
EAM_0213 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EAM_0213 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EAM_0213 (fadB)
00310 Lysine degradation
EAM_0213 (fadB)
00380 Tryptophan metabolism
EAM_0213 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EAM_0213 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EAM_0213 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EAM_0213 (fadB)
00930 Caprolactam degradation
EAM_0213 (fadB)
Enzymes [BR:
eay01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EAM_0213 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EAM_0213 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EAM_0213 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EAM_0213 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
ETF
Motif
Other DBs
NCBI-ProteinID:
CBJ44888
LinkDB
All DBs
Position
complement(258586..260772)
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQGATLSLDWLEDGIAELVFDAPGSVNKLDTQTVTSLGEAITTLEQQPGLRGVLLSSR
KSAFIVGADIMAFLSLFAAPAEQLAQWLAFANGVFNRLEDLPVPTVAAINGYALGGGCEC
VLATDFRIASADTRIGLPETKLGIIPGFGGSVRMPRLLGADSALDIIAGGKDIDAAQALK
VGLVDAVVSVDKLHAAALSVLKEAIAGRLPWRERRQIKLEPLKLSNIEAAMSFSTAEAMV
LQTAGKHYPAPLTVVQTIEAAAGSGRDEAQKLETAAFVPLARSDEARALVGIFLNDQMVK
AKVKKQIKDVAAPERAAVLGAGIMGGGIAYQSACKGVPIMMKDISEKALTLGIGEAAKLL
NKQLMRGKIDGLKLAGIISTIQPVLHYAGFDRVDVVVEAVVENPQVKAEVLAEAEHHIRP
DAILASNTSTIPIDQLAEALTRPENFCGMHFFNPVPRMPLVEVIRGSKTSDATIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPSWL
LDVVGIDTAHHAQSVMAVGFPSRMNKDYRDAVDVLFAAKRYGQKNQQGFWRWETDSKGKL
QKVSDSETDDLLQSVCQPKRVFSDEDIVARMMIPMINEVVRCLDEGVIASPAEADMALVY
GLGFPPFHGGAFRYLDTVSNDRYIARAEPFSALGPLYQVPASLREKATQGASWYSTATPP
DETKLKTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgcaaccctttccctcgactggctggaagacggcatagccgaactg
gtttttgatgcccccggctcggtgaataagcttgatacgcagaccgttaccagcctgggc
gaagccatcacaacgcttgaacagcagccaggattgcgcggagtgctgcttagctcgcgc
aaatcggcgtttatcgtcggtgccgatattatggcgtttttgtccctgtttgccgcacca
gcggaacagctggctcagtggctggcgtttgccaacggcgtctttaaccggcttgaggat
ctgccggtgcctaccgttgcggccattaatggctacgcgctgggcggcggttgtgagtgt
gtgctcgctaccgattttcgtattgccagcgcagatacgcgcatcgggctgccggaaacc
aaattaggcattatacccggttttggcggatcggtgcgtatgccgcgcctgctgggcgct
gacagtgcgctggatattatcgccggcggaaaggacattgatgccgcacaggcactgaag
gttggcctggtggatgccgttgtgtctgtggataaactccacgcggcagcactttccgtg
ctgaaagaagccatagcgggcagattaccctggcgtgaacgtcggcagatcaaactggaa
ccgctgaaactaagcaacatcgaggcagcaatgagtttcagcaccgccgaagcgatggtg
ctgcaaacggccggcaagcactacccggcaccgcttaccgtggtgcaaaccattgaggca
gcggcaggatcaggccgcgatgaagcccagaaactggagacggctgcctttgtgccgctg
gcgcgctctgatgaagcccgcgcgctggttggcatctttcttaatgaccagatggtgaaa
gctaaagttaaaaaacagataaaagacgtcgcagcccctgagcgtgctgccgtattaggt
gccggcatcatgggcggcggcattgcttatcaatctgcctgcaaaggcgtgccgatcatg
atgaaggacattagcgaaaaagcactgacgctggggattggtgaagcggcgaagctgctt
aataagcagttgatgcgtggcaagattgacggcctgaagctggccggcatcataagtacg
atccagccagtgcttcactatgctggctttgatcgcgtcgacgtggtggtcgaagcggtg
gtggagaacccacaggtgaaagccgaagtgctggcggaagccgagcatcatatccgtccg
gatgccattctcgcatcgaatacctcaaccattccaatcgaccagctcgctgaagcatta
acccgcccggaaaatttctgcggcatgcactttttcaatccggtaccgcgtatgccgctg
gtggaggtgattcgcggcagcaaaacgtcagatgccaccatcgccaaagtggtggcctgg
gccagcaaaatgggcaaaacgccgattgtggtcaatgactgccccggcttctttgttaac
cgcgtgttgttcccttacttcgccggtttcagcctgttactgcgcgatggtgccgacttc
cgccaaatcgacaaagtgatggaaaaacagtttggctggccgatgggcccttcgtggctg
ctggacgtggtgggcattgataccgcacatcatgcacaaagcgtgatggcagtcgggttc
ccgtcgcggatgaacaaggattatcgcgacgccgttgatgtgctgtttgcggcgaaacgc
tacgggcagaaaaaccagcagggcttctggcgctgggaaaccgacagcaagggcaagctg
cagaaagtctccgacagcgaaaccgatgatctgctgcaaagcgtctgccagccaaaacgt
gttttcagcgatgaagatatcgtggcgcgcatgatgataccgatgatcaacgaagtggtg
cgatgtctggatgaaggcgtgatcgccagcccggcagaggccgatatggcgctggtttat
ggtctcggtttcccaccattccacggcggtgctttccgctatctggacaccgtaagcaac
gatcgctatatcgcgcgcgccgagccgttcagcgcgctaggcccgctctatcaggtgccg
gcaagtttacgtgaaaaggcaactcaaggcgcgagttggtattccacggcgactccgccg
gatgagacaaaattaaaaacggcgtga
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