KEGG   Intestinibaculum porci: SG0102_03900
Entry
SG0102_03900      CDS       T05736                                 
Name
(GenBank) hypothetical protein
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
ebm  Intestinibaculum porci
Pathway
ebm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ebm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SG0102_03900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebm03021]
    SG0102_03900
   03400 DNA repair and recombination proteins [BR:ebm03400]
    SG0102_03900
Transcription machinery [BR:ebm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SG0102_03900
DNA repair and recombination proteins [BR:ebm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SG0102_03900
SSDB
Motif
Pfam: HARE-HTH NUDIX_4
Other DBs
NCBI-ProteinID: BBH25456
UniProt: A0A3G9J3X1
LinkDB
Position
402194..402523
AA seq 109 aa
MDYSQTSMVDVAYDIMEGLKAPIDFYELWEQVAEKKNFTTEERDENESVFYTNITLDGRM
ITVGENRWDLRERHKFEDVHIDMNDVYSDDEEEEEETDDGSIEDSYSDD
NT seq 330 nt   +upstreamnt  +downstreamnt
atggattactcacagacttcaatggttgatgttgcttacgacatcatggaaggcctgaaa
gccccaatcgatttctatgaattatgggaacaggtcgcagaaaagaaaaacttcacaaca
gaagaaagagatgaaaacgaatctgtattctataccaatattactttagatggtcgtatg
atcactgttggtgaaaacagatgggatttaagagaacgtcataaatttgaagatgttcat
attgatatgaatgatgtttattctgatgacgaagaggaagaagaagaaacagacgacggt
tcaatcgaagatagctatagcgatgattaa

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