Escherichia coli B REL606: ECB_02517
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Entry
ECB_02517 CDS
T00944
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ebr
Escherichia coli B REL606
Pathway
ebr00250
Alanine, aspartate and glutamate metabolism
ebr00310
Lysine degradation
ebr00350
Tyrosine metabolism
ebr00650
Butanoate metabolism
ebr00760
Nicotinate and nicotinamide metabolism
ebr01100
Metabolic pathways
ebr01120
Microbial metabolism in diverse environments
Module
ebr_M00027
GABA (gamma-Aminobutyrate) shunt
ebr_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECB_02517 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECB_02517 (gabD)
00310 Lysine degradation
ECB_02517 (gabD)
00350 Tyrosine metabolism
ECB_02517 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ECB_02517 (gabD)
Enzymes [BR:
ebr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ECB_02517 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ECB_02517 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ECB_02517 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ACT40170
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Position
2685953..2687401
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AA seq
482 aa
AA seq
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MKLNDSKLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLLMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALSSKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaaattattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgatgtcaccaatccggcgaacggcgacaagctgggt
agcgtacccaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgct
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgttgatggagcatcaggacgatttagcgcgcctgatgaccctagaacagggcaaa
ccgctggctgaagcgaaaggcgaaattagctacgccgcctcctttattgagtggtttgct
gaagaaggcaaacgcatttatggcgacaccattcctggtcatcaggccgataagcgcctg
attgttatcaagcagccgattggcgtcaccgcagctatcacgccgtggaacttcccggcg
gcgatgattacccgcaaagccggtccggcgctggcggcaggctgcaccatggtgctgaag
cctgccagtcagacgccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggggtatttaacgtggtcaccggttcggcgggcgcggtgggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggtgcgctgtcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaattgcacatcggcgac
gggctggagaaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgttccagccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccactgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcatcatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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