Escherichia coli B REL606: ECB_02542
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Entry
ECB_02542 CDS
T00944
Symbol
ygaG
Name
(GenBank) S-ribosylhomocysteinase
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
ebr
Escherichia coli B REL606
Pathway
ebr00270
Cysteine and methionine metabolism
ebr01100
Metabolic pathways
ebr01230
Biosynthesis of amino acids
ebr02024
Quorum sensing
ebr02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ECB_02542 (ygaG)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECB_02542 (ygaG)
02026 Biofilm formation - Escherichia coli
ECB_02542 (ygaG)
Enzymes [BR:
ebr01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
ECB_02542 (ygaG)
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Motif
Pfam:
LuxS
DUF749
AMG1_II
Motif
Other DBs
NCBI-ProteinID:
ACT40195
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All DBs
Position
complement(2709077..2709592)
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AA seq
171 aa
AA seq
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MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF
AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI
PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgcagttcgg
gtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttc
tgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacctgttt
gctggttttatgcgtaaccatcttaacggtaatggtgtagagattatcgatatctcgcca
atgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgtt
gctgatgcctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatc
ccggaactgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcag
gatattgcgcgtagcattctggaacgtgacgtacgcatcaacagcaacgaagaactggca
ctgccgaaagagaagttgcaggaactgcacatctag
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