Shimwellia blattae: EBL_c38950
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Entry
EBL_c38950 CDS
T02111
Symbol
rfaF
Name
(GenBank) ADP-heptose--lps heptosyltransferase II involved in lipopolysaccharide core biosynthesis
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ebt
Shimwellia blattae
Pathway
ebt00540
Lipopolysaccharide biosynthesis
ebt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EBL_c38950 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
EBL_c38950 (rfaF)
Enzymes [BR:
ebt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
EBL_c38950 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
Core region
EBL_c38950 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
AFJ48923
UniProt:
I2BEG9
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All DBs
Position
4033212..4034258
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLARMPEVNEAIPMPLG
HGALEIGERRRLGISLRGRRYDRAYVLPNSFKSALVPFFAHVPHRTGWLGEMRYGLLNDA
RKLDKSAWPLMVERYVALAYDKGAMENARDLPRPLLWPQLQVDDKEKAPMCARFGLSAGR
PIIGFCPGAEFGPAKRWPHYHYAQLAAKLIDEGYQIVLFGSAKDSEAGNQILASLTSEQQ
ACCFNLAGDTTLDQAVVLIASCKAVVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
QARVIRLITGYLKVRKGEGDEGYHQSLIDIQPERVADELHALLQEQEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggtgattggcccgtcatgggtgggcgacatgatgatgtcgcaaagtctg
tatcgcacgctcagggcgcgttatccccaggcgataattgatgtgatggcaccggcctgg
tgccgtccgctgttagcgcgtatgccggaagtgaacgaggccatccccatgccgctgggc
cacggcgcgctggaaattggcgagcgccgccgcttaggaataagcctgcgcgggcgccgc
tatgatcgcgcctacgtgctgccaaactcatttaaatccgccctggtgcctttttttgcc
catgtcccgcaccgtacagggtggctgggcgaaatgcgctatggcctgcttaatgatgcc
cgcaagctggacaagagcgcctggccgctgatggtcgagcgctacgtggcgctggcttac
gataaaggcgcgatggaaaacgcacgcgatcttccccggcccctgctctggccgcaatta
caggtcgacgataaagaaaaagcgccgatgtgcgcccggttcggcttgtctgccgggcgg
ccgatcatcggtttttgccccggtgcggaatttggcccggccaagcgctggccccattat
cactacgcacagctggccgcaaaactgattgatgagggctaccagatagtcctgttcggc
tcggcaaaagacagcgaagcgggtaatcagatcctcgcctcactgaccagtgagcagcag
gcctgctgctttaatctggcgggggataccacactcgatcaggccgtggtgctgattgcc
tcctgcaaagcggtggtgaccaatgactccgggctgatgcatgttgccgctgcgctgaac
cgcccgctggtcgccctttacggccccagcagcccggattttaccccgccgctttctcat
caggcgcgggttatccgcctgattaccggctacctgaaagtacgcaagggcgagggggat
gaaggctaccatcagagcctgattgatattcagccggaacgggtggctgacgaactccac
gccttattgcaggaacaggaagcctaa
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