Empedobacter brevis: F0358_00110
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Entry
F0358_00110 CDS
T06196
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00020
Citrate cycle (TCA cycle)
ebv00640
Propanoate metabolism
ebv00660
C5-Branched dibasic acid metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01120
Microbial metabolism in diverse environments
ebv01200
Carbon metabolism
Module
ebv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ebv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
F0358_00110 (sucD)
00640 Propanoate metabolism
F0358_00110 (sucD)
00660 C5-Branched dibasic acid metabolism
F0358_00110 (sucD)
Enzymes [BR:
ebv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
F0358_00110 (sucD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
DapB_N
IlvN
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QES91230
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All DBs
Position
complement(22599..23468)
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AA seq
289 aa
AA seq
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MSVLVNKDSKIIVQGFTGKEGTFHAEQMIEYGTQVVGGVTPGKGGQTHLGLPIFNTVKDA
VDQAGADVSIIFVPPAFAADAVMEAADAGIKVIICITEGIPVEDMVKVQAYVDQRDVTLI
GPNCPGVITSEEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQVVKAGYGISTAIGIGG
DPIIGTTTKEAVELFMNDPETECIVMIGEIGGQLEAEAARWIKANGTKPVVGFIAGQTAP
KGRTMGHAGAIVGGAEDTAQAKMAIMEECGIHVVSSPADIGATVAKVLG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattagtaaacaaagattcaaaaataatcgttcaaggattcacagggaaagaa
ggaacttttcatgcggaacaaatgattgaatacggaactcaagtagtaggtggtgtaaca
ccaggaaaaggtggacaaactcacttaggattaccaattttcaacacagttaaagatgca
gtagatcaggcaggtgctgatgtatctatcatcttcgttccaccagcatttgctgcggac
gctgtaatggaagctgctgatgcggggattaaagtaattatctgtattacggaaggtatt
ccggtagaagatatggtaaaagtacaagcgtatgtagaccaaagagatgtaacattgatc
ggaccaaactgtcctggtgttattacttctgaggaggctaaggttggtattatgcctgga
tttattttcaaaaaaggaaaagttggtattgtttctaaatcaggaacattaacttatgaa
gctgctgatcaggttgtaaaagccggttacggaatttctacagcgattggtattggtgga
gatccaattattgggacaacaactaaagaagcagttgaattatttatgaatgacccggaa
acagagtgtatcgtaatgattggtgaaattggtggtcaattagaagcagaagctgctcgt
tggattaaagcgaatggaactaaaccggttgtaggatttatcgcaggtcaaactgcacca
aaaggtcgtacaatgggacatgccggagcaatcgtaggtggagctgaagatacagcgcaa
gctaaaatggcaattatggaagaatgtggtatccacgttgtttcttctcctgctgatatc
ggagcaacagttgcgaaagttttaggataa
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