Empedobacter brevis: F0358_13280
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Entry
F0358_13280 CDS
T06196
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00362
Benzoate degradation
ebv01100
Metabolic pathways
ebv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F0358_13280
00624 Polycyclic aromatic hydrocarbon degradation
F0358_13280
Enzymes [BR:
ebv01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
F0358_13280
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Motif
Pfam:
Dioxygenase_C
DUF5677
Motif
Other DBs
NCBI-ProteinID:
QES93620
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Position
complement(2788086..2789315)
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AA seq
409 aa
AA seq
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MKKIMRCNILLLCLLFVSCNGQTNEKVQKETTAIVGGGCDGCELMYIGMPEEISSVSTSP
GWNEKGQKLIVTGTVFQPDGKTPAPNVILYYWQTDAGGYYTPKPEMEERTKRHGYIRGWV
KTGVNGKYSIKTIRPAPYPDEDSPAHIHLSVKEPDIANEYYTDEIHFDDDKLLIPYKKKN
KLENRGGSGIVRILLQDSLQIAEHDIVLGLNIPNYPKKVTADISSGLSIGEDQPSFVPFH
AFGPDKGTQTCPVCKYGRYHGILYFVGNYPDWTAIKKWLQFLEQESEKRKHYLKVYFVYG
NESKYSKKQRQKELEQIGKELNIKNTALTFVPSFSDKATEADLNKINPDVQNTFIIYKHR
SIVDKYINLKPTHENFNMLSDALDQTQGDYFHLPEPEAHGLNRGRMFKP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataatgcgttgcaacatcctgttgctgtgcctgttgtttgtaagctgcaac
gggcagaccaatgaaaaagtacaaaaagaaacgacagccattgtaggaggtggctgcgat
ggctgcgaactgatgtacattggcatgcctgaagaaatttcttctgttagcacaagtccc
ggatggaatgaaaaaggacaaaaactaatcgttaccggaaccgtttttcaacccgatggc
aaaacacccgcgccaaatgttatcctctattattggcagaccgatgccggcggttactat
acaccgaaacccgaaatggaggaaagaaccaaacgacacggctatatccgcggttgggta
aaaaccggtgtaaacggaaagtattccataaaaaccatacgtcccgcgccttatccggat
gaggactcgccggcgcatattcacctgtccgtcaaagaacctgatatagccaacgaatat
tataccgacgaaatccattttgatgatgataaactgcttatcccgtataaaaagaaaaac
aagctcgaaaacaggggcggaagcggtattgtacgcatcttgctgcaagacagcctgcag
attgccgagcacgacatcgtgctgggtttaaacattccgaattatcccaaaaaagtaaca
gctgacatctcatccgggttaagtataggcgaagaccagccctcttttgtgccttttcat
gctttcggacccgataaaggaacccaaacctgtcccgtctgcaaatacggtcgctatcac
ggtattctgtattttgtgggcaactatcccgattggacagccataaaaaaatggttgcag
tttttagaacaggaaagtgaaaaacgcaaacactacctgaaagtctattttgtgtatgga
aatgagagcaagtacagcaaaaagcaacgacaaaaagaattggagcaaataggaaaggaa
ctcaacatcaaaaacacagccctgacgtttgtgccgtccttttcggataaagcaaccgaa
gccgacctgaataaaatcaatcccgatgtacaaaatacctttatcatttacaaacacaga
agcattgtagacaagtatatcaacctgaaaccaacacatgaaaatttcaacatgctgtct
gatgcgttagaccaaacacaaggcgattatttccatttacccgagcccgaagcccacggt
ttaaaccgtgggcgaatgtttaaaccgtga
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