Xiamenia xianingshaonis: J7S26_03960
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Entry
J7S26_03960 CDS
T08443
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ebz
Xiamenia xianingshaonis
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebz03009
]
J7S26_03960 (rimO)
Enzymes [BR:
ebz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J7S26_03960 (rimO)
Ribosome biogenesis [BR:
ebz03009
]
Prokaryotic type
ribosomal protein modification factors
J7S26_03960 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TraT
Motif
Other DBs
NCBI-ProteinID:
QTU85068
UniProt:
A0A9E6MRI7
LinkDB
All DBs
Position
1056908..1058224
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AA seq
438 aa
AA seq
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MTYANIGRPSVAFVTLGCAKNEVDSANMAASLTQAGFDVVKDPEDASAVIVNTCSFIQSA
AEESIEAILDAAGLKNVESGAPLIVSGCLPARYGAELEDELPEAAAFLPCSKEDDIVAVV
LHALGLACSPADVPGMPPLDAGEAAGCASAYVKISDGCDRFCSFCTIPFIRGRYHSFPAA
DVEAAVARHVAAGVREIVLIAQDTGRWGQDFADPSTLAALLSHLAETFPDTWFRVMYTEP
VGVTDELLNVMAAHENVCSYLDIPLQHVDAGILQAMNRSGSRTEFETLVAHVRDRVPDVT
LRTTLIAGFPGETEEAFEDLLDFVSEGHFDYVGVFPYSREEGTRAARLPGQIDEDEKIDR
ASRLRDVADAVCTARIAERVGQKAVVLVEGAEDDGQLFGRTQAQAPEVDGATYVGAGTVG
DFLSVTIVDTLFYEMEGE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacctatgccaacatcggacgcccgagcgtcgctttcgtcacgctcggctgcgcgaaa
aacgaggtcgactcggccaacatggcggcaagcttgacgcaggccggcttcgacgtggta
aaagaccccgaagacgcgagcgcggtcatcgtcaacacctgctcgttcatccagagcgcc
gccgaggaaagcatcgaggccatcctcgacgcggcgggcttgaaaaacgtcgaaagcggc
gcgccgctcatcgtcagcggatgtctgccggcccgctacggagccgagctggaagacgag
ctgcccgaggcggcggcgtttttgccgtgcagcaaagaggacgacatcgtggcggtcgtg
ctgcatgcgcttggcctggcgtgctcgccggccgacgtgccgggcatgccgccgctcgac
gcaggggaggccgccggctgcgcaagcgcctacgtgaagatttccgacggatgcgaccga
ttttgctcgttttgcaccattccgttcatccgcggccgctaccacagctttccggcggca
gacgtcgaggccgccgtggcgcggcatgtcgccgcgggcgtgcgcgaaatcgtgctcatc
gcgcaggacacagggcgctggggccaggatttcgccgatccttcgacactggccgcgctc
ctgtcgcatctggccgaaacgtttcccgacacgtggtttcgcgtcatgtacaccgagcct
gtcggcgtgactgacgagctgctcaacgtcatggcggcgcatgaaaacgtgtgctcctac
ctcgacattccgttgcagcacgtcgacgcgggcattctgcaggccatgaaccgcagcggc
tcgcgcaccgagttcgagactctggttgcgcacgttcgcgaccgcgtgcccgacgtgacg
ctgcggacgacacttatcgcgggctttcctggcgaaaccgaagaggctttcgaagacctt
ctcgacttcgtgtccgaggggcatttcgactacgtcggcgtgtttccctactcgcgagag
gaaggaactcgagccgcacgcctgccgggccagattgacgaggacgagaagatcgaccgc
gcgagccggctgcgcgacgtggccgacgcggtctgcacggcgcggatcgccgagcgggtc
gggcagaaggccgtcgtgctcgtcgagggcgcagaagacgacggccagctgttcgggcgc
acccaggcccaggcgcccgaagtcgacggcgccacctatgtcggcgcaggcacggtcgga
gacttcctctccgtgaccatcgtcgacacgctgttctatgaaatggaaggggagtag
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