Erigeron canadensis (horseweed): 122582561 Help Entry 122582561         CDS       T07610                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism ecad  Erigeron canadensis (horseweed) Pathway ecad03030   DNA replication ecad03410   Base excision repair ecad03420   Nucleotide excision repair ecad03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ecad00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     122582561    03410 Base excision repair     122582561    03420 Nucleotide excision repair     122582561    03430 Mismatch repair     122582561  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ecad03032]     122582561    03400 DNA repair and recombination proteins [BR:ecad03400]     122582561 Enzymes [BR:ecad01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      122582561     6.5.1.6  DNA ligase (ATP or NAD+)      122582561     6.5.1.7  DNA ligase (ATP, ADP or GTP)      122582561 DNA replication proteins [BR:ecad03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     122582561  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      122582561 DNA repair and recombination proteins [BR:ecad03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      122582561    NER (nucleotide excision repair)     Other NER factors      122582561    MMR (mismatch excision repair)     Other MMR factors      122582561 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase HTH_36 Motif Other DBs NCBI-GeneID:  122582561 NCBI-ProteinID:  XP_043610903 LinkDB All DBs Position 9:complement(31157856..31164226) Genome browser AA seq 790 aa AA seqDB search MLSLRPFIKHSLLKPSSSSSNLSLFSSIFLKPPNHSYSTIFKMSQSPKKKNAFAVMMAKR PNPNTQKNTKTTSSPSSSPKKLKTLDSTSKPQINSTQITNQPDPISNSNKTHKNPQIPIT QNGLIQDSLKNPNLEIENGPKEEEKGISVDESIVQLKTSPEKFNPKKAGYWGVGKRVPFL FLARVFDVVANESGRNANIDTVCNMLRTVIDATPDDLVQIVYLLANRIAPAHEGLELGIG DASIIKALAEACGAKETHIKKQYKELGDLGLVAKASRSSQPLMWKPQPLTVAKVFETFRV IAKESGKDSQDKKKNHIKGLLVAATDCEPLYLIRLLQTKLRIGLGEETLLTALGHAIYYT NKHSLPPANAGSSTEEAAKIVKQVYSVLPVYDKIVPALLSGGVWNLPKTCFFSLGVPVGP MLAKPTKGVSEILDKFQNIEFTCEYKYDGERAQIHYMEDGTVQIYSRNAERNTEKFPDVV VAVARVKKPSVTSFVLDCELVAYDREKQKILPFQILTTRARKNVVMSEIKVDVCIYAFDL LYLNGQQLLQEQLNVRRERLYESFVEEPGFFQHATAVTSNDLEEIQTFLDAAVDASCEGL IIKTLTRDATYEPAKRSNNWLKLKKDYMDSIGDSLDLVPIGAFHGKGKRVGGYGAFLLAC YDYDKDEYQTICKTGTGFSDQVLEERSDSLRAKVIPSPKSYYRCGSINPDVWFEASEVWE VKAADLTISPVYCAAIGAVDPNKGISLRFPRLLRVRDDKGPDEATSAEMVADMYNAQKHT QSSNKNNDDE NT seq 2373 nt NT seq  +upstreamnt  +downstreamnt atgttatcactcaggccgtttatcaaacactctcttcttaaaccctcatcatcatcatca aatctatctctattctcttcaatctttctcaaacctcctaatcattcatattcaacaatc ttcaaaatgtcacaatctcctaaaaagaaaaacgcatttgctgtcatgatggcaaaacga cctaaccctaatacacaaaaaaacaccaaaacgacgtcgtctccttcatcttcccctaaa aaactcaaaaccctagattcaacttcaaagccccaaatcaattcaacccaaattaccaac caacccgacccaatttcaaattcaaacaaaacccacaaaaacccccaaatacccatcacc cagaatgggctaattcaagattccctaaaaaaccctaatcttgaaattgaaaatgggcct aaagaagaagaaaagggtattagtgtagatgaaagtatagttcaattgaaaacaagccct gaaaaatttaacccgaaaaaggcggggtattggggtgtaggaaaaagggttccttttttg tttcttgctagggtttttgatgtagttgcgaatgaatcgggtcgaaatgcgaatatcgat actgtttgtaatatgttgaggactgttattgatgctacacctgatgatttagttcaaatt gtgtatcttttagcaaatagaatagccccagctcatgaagggttagagcttggtattggt gatgctagtattattaaggcacttgccgaagcttgtggtgctaaagaaacacatatcaag aagcaatataaggaattgggggacttgggtcttgttgctaaagcgagtcgttcgtcgcaa cctttgatgtggaaaccgcagccattgacggtggctaaagtttttgaaacgtttcgggtt attgccaaggaatccggcaaagacagtcaagataaaaagaagaatcacattaagggtctt cttgttgcagctactgattgtgaacctctatatttgatccgtttacttcagaccaaattg cgtattggattaggagaggaaactctcttgactgccctgggacatgccatatactatact aacaaacattcattgccgccagcaaacgcaggttcatcgacagaggaggctgccaaaatt gtgaaacaagtgtattctgtacttcctgtatatgataaaatagtccctgctcttctttct ggtggtgtatggaatttgcccaaaacctgtttcttctcattgggtgttccagttggacct atgcttgctaagcctactaaaggagtatctgagatcttagataagtttcagaatatagaa ttcacttgtgaatacaaatatgatggtgaacgggcccagatacattatatggaggatggg acggttcagatatatagtagaaatgctgaaagaaacactgaaaagttccctgatgttgtt gttgctgttgcaagagttaaaaaacctagcgtaacatcgtttgttttggattgtgaactg gttgcatatgaccgtgagaagcaaaaaattcttccatttcagattttgactacgcgtgct cgcaaaaacgttgtcatgagtgaaatcaaggttgatgtatgcatctatgcctttgatttg ttgtatctaaatggacagcagcttttgcaggaacagctcaatgtccgtagagagcggctg tatgaatcttttgttgaagagcctggatttttccagcatgcaacagccgtgacgtcaaat gatcttgaggaaattcaaacatttttagacgccgcagtcgatgccagttgtgagggacta attatcaaaactttaacccgggatgctacatatgagcctgcaaagcgatcaaataactgg ctcaagctaaagaaagactatatggacagtattggtgactcgttagatttagtaccaatt ggtgccttccacggaaaaggaaaacgtgtaggtggatatggtgccttcctgcttgcttgt tatgactatgataaggatgaatatcaaaccatttgcaagacaggcactggattttctgac caagtgctcgaggagaggtctgatagtcttcgtgctaaagtgatcccgagtccaaagtca tactaccgatgcggtagcataaatcccgatgtgtggtttgaggcatctgaggtttgggag gttaaagctgcagacttgaccatcagccctgtttattgtgctgcaattggtgcggttgat cccaataagggtatatcactacgatttccacgattacttcgtgttcgagatgacaaaggc ccagacgaagctacatctgcggagatggttgctgacatgtataatgctcagaaacatact caaagtagcaataaaaataatgatgatgaatga

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