Erigeron canadensis (horseweed): 122585884
Help
Entry
122585884 CDS
T07610
Name
(RefSeq) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122585884
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122585884
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122585884
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
122585884
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (A)
122585884
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122585884
Prokaryotic type
Other AARSs
122585884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
122585884
NCBI-ProteinID:
XP_043613934
LinkDB
All DBs
Position
1:complement(39999166..40007985)
Genome browser
AA seq
784 aa
AA seq
DB search
MAEKPLELFLKIGLDKKTAENTIANNKVTTNLIAVINEASVTDGCERSTGNLLYTVATKF
PANALVHRPKLLEYIVSSKIKTPTQVEAAFAFLTVTASGELDISKFEDACGVGVEVSREE
IVHTVNEIFEEKESSILEQRYRTNVGDLFAHVRKKQPWADPKIVKELIDSKLSALLGPKT
AADNEKPVKKKKEKPVKVEEKTTEEAPQPSEEELNPYLIFPAPEENYKVHTEVFFSDGRV
LRACNSKAILEKHLNITGGKVVTRFPPEPNGYLHIGHAKAMFVDFGLAKERDGGCYLRFD
DTNPEAEKKEYIDHIEEIVDWMGWKPFKITYTSDYFQELYDLAVELIRRGHAYVDHQTGD
EIKEYREKKKNSPWRDRPISESLKLFDDMKQGRIEEGKATLRMKQDMQSDNFNMYDLIAY
RIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLDALSLYQ
PYVWEYSRLNITNTVMSKRKLNRLVTENYVDGWDDPRLMTLSGLRRRGVTSTAINTFVKG
IGITRSDGSLIRLERLEYHVREELNKTASRTMVVLHPLKVVITNLEPSSVIDLDAKKWPD
APADDASSYYKVPFSRIVYIEQSDFRMNDSKDYYGLAPGKTVLLRYAFPIKCTEVVLSDD
KNTVVEIHAEYDPFKKTKPKGVLHWIAEPSPGVDPLKVEVRLFDKLFLSENPGELDNWLD
DLNPESKVVMPCAYAVPSLKHTEVDDKFQFERLGYFVADKDSTPEKLIFNRTVTLRDSYG
KSWK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaccattggagctgtttttgaagatcggtttagataaaaaaacggctgaa
aacacaattgctaataataaagttactactaatcttatcgctgtcattaatgaggcgtct
gtcactgatggatgtgaacggtctacgggtaatcttctttatacggttgctacaaagttc
cctgccaatgcccttgtgcatcgtcctaagttgcttgaatacattgtttcttccaagata
aagactcctacccaggtagaagctgcattcgcatttcttactgtcactgcttctggggag
cttgacatcagtaaatttgaagatgcttgtggagttggtgttgaggtctctcgtgaagag
atagtgcacactgttaatgaaatctttgaagagaaagagagttcaatcttggagcaacgt
tacagaacaaatgttggtgatctatttgctcatgtgcgaaagaagcagccttgggcagat
ccaaagattgtcaaggaacttatagattcaaagctatctgcactacttggtccaaagact
gcagcagataatgagaagcctgttaaaaagaagaaagagaagcctgttaaagtagaggaa
aaaaccactgaagaagctcctcaaccatctgaagaagagctcaatccttatttaatattc
cctgcacccgaggagaattataaggtgcacacagaagtatttttcagtgatggacgtgtg
ctcagagcttgcaattccaaagcaatactagagaaacatctcaacattacaggaggaaaa
gttgttacccgttttccaccagaaccaaatggatacctgcatatcggtcatgctaaggct
atgtttgttgactttggtcttgcaaaagaaagagatggtggctgctacttgaggtttgat
gatactaaccctgaagctgagaaaaaggaatatattgatcatattgaagaaattgtagat
tggatgggatggaagccttttaagatcacatacaccagtgattattttcaagaactgtat
gatttagcagtggagctcatacgcaggggtcatgcttatgttgatcaccagactggtgat
gagataaaggagtacagagagaaaaagaagaacagtccatggagggataggccgatctca
gaatcacttaaactttttgatgatatgaaacaagggaggattgaagaaggaaaagctaca
cttagaatgaaacaagacatgcagagtgataactttaatatgtatgacctcattgcatat
cggataaagttcacccctcatccacatgctggagacaagtggtgcatctacccaagttat
gactatgcacattgcattgtggattctcttgaaaatataacacattcattatgcacactg
gagtttgagacacggcgtgcttcttactattggttgctggatgcgctgagcctttaccag
ccctatgtgtgggaatattcacgcctgaatataacaaacactgtcatgtcaaaacgcaag
ttaaaccgcctcgtgactgaaaattatgtggatgggtgggatgatcctcgtttgatgaca
ctttcgggattgcgccgcaggggtgtcacttctactgcaataaacacatttgttaaagga
atagggattactagaagtgatggtagtttgatacgtttggaacgccttgaatatcatgtt
cgcgaagaattaaataaaacagcttctcggacgatggttgtgctacatccactaaaggtt
gttattactaatcttgaacctagctcagtaatagatcttgatgcaaagaaatggccggat
gctccagccgatgatgcatcatcttactacaaggtcccattttcgaggattgtctatatt
gagcaatctgactttcgaatgaatgattcaaaagactattacgggcttgctccaggaaag
actgtcttactcagatatgcatttcctatcaagtgtactgaagtggtgctttctgatgat
aaaaatactgttgttgagatacatgctgagtatgatcctttcaagaaaacaaaaccaaag
ggtgttcttcattggatagcagagccgtctcctggggttgaccctctgaaggtggaagtc
agactttttgacaagctgtttctttccgagaatcccggagaacttgataactggcttgat
gatttaaaccccgagtctaaagtggtaatgccatgtgcttacgccgtaccatctctcaaa
cacacagaggtggatgacaagtttcagttcgaaaggctcggctattttgtggctgataaa
gactcaacacccgagaaactcatatttaaccgaactgtaacattgagggacagttacggc
aaatcctggaagtag
DBGET
integrated database retrieval system
