Erigeron canadensis (horseweed): 122588819
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Entry
122588819 CDS
T07610
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00630
Glyoxylate and dicarboxylate metabolism
ecad00710
Carbon fixation in photosynthetic organisms
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01200
Carbon metabolism
Module
ecad_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ecad_M00532
Photorespiration
ecad_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122588819
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
122588819
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
122588819
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Motif
Pfam:
RuBisCO_small
RbcS
Motif
Other DBs
NCBI-GeneID:
122588819
NCBI-ProteinID:
XP_043616963
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Position
2:complement(36426136..36427688)
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AA seq
176 aa
AA seq
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MASISSSAVVSRTAPAQASMVAPFTGLKANTFPVTKKSNDFSSLPSNGGRVQCMKVWPPL
GLKKYETLSYLPPLTDIQLAKEVDYLLRNKWVPCLEFEVEHGFVYREHNASPGYYDGRYW
TMWKLPMFGCTDSAQVIQELGECKKEYPNAFIRIIGFDNVRQVQCISFIASKPPGY
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatctcatcctcagctgtcgtcagccggaccgcacctgctcaagctagcatg
gtggctccattcaccggccttaaggccaacaccttccccgttaccaagaagtctaacgac
ttctcatcccttcctagcaacggtggaagagtgcaatgcatgaaggtgtggccaccactt
ggattgaagaaatacgaaactctttcataccttccaccattgaccgatatccaattggct
aaggaagtcgactacttgctccgcaacaaatgggttccttgtttggaattcgaagtcgag
cacggattcgtttaccgtgagcacaacgcaagccccggatactatgacggacgatactgg
acaatgtggaagttgcctatgttcgggtgcactgactcagctcaggtcattcaggagctc
ggcgagtgcaagaaggagtaccccaatgccttcatccgtatcatcggattcgacaacgtt
cgtcaagtccaatgtatcagtttcattgcttccaagccaccaggctactaa
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