Erigeron canadensis (horseweed): 122589094
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Entry
122589094 CDS
T07610
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00052
Galactose metabolism
ecad00511
Other glycan degradation
ecad00531
Glycosaminoglycan degradation
ecad00600
Sphingolipid metabolism
ecad00604
Glycosphingolipid biosynthesis - ganglio series
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122589094
09103 Lipid metabolism
00600 Sphingolipid metabolism
122589094
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122589094
00604 Glycosphingolipid biosynthesis - ganglio series
122589094
00511 Other glycan degradation
122589094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122589094
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
122589094
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122589094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
122589094
NCBI-ProteinID:
XP_043617273
LinkDB
All DBs
Position
2:complement(46024308..46030701)
Genome browser
AA seq
701 aa
AA seq
DB search
MMKRRSLKTTTIIIFILLCLLAFSTVFAPLPLPLPLHHNINNKQPPKHHHRHHHHQVAVN
ARKFEIADDMFIKDGQPFRIIGGDLHYFRTLPAYWEDRLLRAKALGLNAIQTYVPWNLHE
PKEGQLDFSGIADIVSFLELCHKLDLLVMLRPGPYICAEWDFGGFPAWLLTKQPAIKLRS
SDPTYLALVDSWWGILLPKIAHLLYHKGGPIIMVQIENEFGSYGDDKDYLHHLVKLARSH
LGGDIILYTTDGGTRETLTKGTISGDAVFSAVDFSTGEDPWPIFKMQKEYNAPGKSPPLS
AEFYTGWLTHWGENIATTDAASTAAALEKILSRNGSAVLYMAHGGTNFGFFNGANAAQES
DYNADLTSYDYDAPISESGDVDGAKFKALRGVIAKYTPVSLPPAPSNNEKTGYGRIQLEK
KASLFDTLDNDLSIQAIESENPISMEAAGQMFGFLLYASEYIAKGKGNTLSIPKVHDRAQ
VYVTCLSEDTRARPQYVGTTDRWSNNHVNLPNAKCASSSRLLLILVENMGRVNYGQYLFD
SKGILSAVYLDGKPLLNWKMLPIPLSNLNEFPEIRPVFNKSYSNLVEVSTRKNLKSKHMG
MNIKEPTLYTGTFVVDKVTDTYMSFKGWGKGVAFVNDFNIGRFWPSFGPQCNLYVPAPIL
RRGKNNLVVFELESPEPELVVKSVDQQDFTCGSKNLSVRQL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgaagaagcctgaaaacaacaacaatcatcatcttcattctattatgtctc
cttgctttctccactgttttcgcccctctccctctccctctccctctccatcataatatt
aataataaacaacccccaaaacatcatcatcggcatcaccatcatcaagttgctgttaat
gcccgaaagtttgagatcgcggatgatatgttcataaaagacggacagccttttcggatc
atcggcggtgacttgcattatttccgtacacttcctgcttattgggaagataggttatta
agagcaaaggcattgggattgaatgcgattcaaacttatgttccatggaatctacatgaa
cctaaagaaggtcaacttgattttagtggcattgcggatatagtttcatttcttgagctg
tgtcacaagttggatttgttggtcatgttacggcccgggccttacatttgtgcagaatgg
gattttggtggtttccctgcctggttacttactaaacaaccggccatcaaactaagatca
tccgacccaacataccttgctttggttgatagctggtggggaatactacttcctaaaatt
gcccatcttctataccacaaaggaggacctatcatcatggttcagatagagaacgaattt
ggttcatacggagatgacaaagattatctgcatcatttggtcaagttagcaaggtcacat
ctcgggggtgacataattttatatactacagatggaggcactagagaaactctcactaaa
ggaactattagcggagatgctgtcttttcagccgttgatttttcaactggagaggatcct
tggcctatttttaagatgcaaaaggaatataatgcaccgggaaaatcaccacccctttct
gcagagttttacaccggttggcttacacattggggagagaatattgctacaacggatgca
gcttctacagctgctgccttggaaaagattctgtctaggaatggctctgctgtgctttat
atggcccatggtggaaccaattttggatttttcaatggtgcaaacgctgctcaagaatcc
gactacaatgctgatcttacatcctatgattatgatgctcctattagtgaatctggtgat
gtggatggtgcgaagttcaaagcattgcgaggcgttatagctaagtacactccagtttct
ctccctccagctccttcaaataatgaaaagacaggatatggccgtattcagttagaaaaa
aaagcatctttatttgatacactggacaatgacttgtccatccaagctatcgaatccgag
aacccaatttcaatggaagctgcagggcagatgtttggatttttgttatatgcatctgaa
tacatagctaagggtaaggggaacactttgtctataccaaaggtacatgacagagcccaa
gtatatgttacatgcctttctgaagatacaagggcaagaccacaatatgttggcacaact
gatagatggtcaaataaccatgttaatcttcctaatgccaaatgtgcttccagcagtaga
ctgttgttaattctggtcgaaaacatgggtcgtgtgaattatgggcagtacttgtttgat
agcaagggcatactgtcagctgtttacttagatgggaaacctctgcttaattggaagatg
ttaccgattcctctcagcaatctaaacgagttccctgaaatcagaccagttttcaacaag
tcatattctaatttggttgaagtttctacccgtaaaaacctgaaaagcaaacacatgggg
atgaatataaaagaaccaactttgtatactggtacttttgttgttgacaaagtaacagac
acatacatgtccttcaaaggctggggtaaaggtgtcgcatttgttaatgacttcaatatt
gggagattctggccgtcatttgggccccagtgtaatctctatgttcccgctccgatcctc
cgacgtggaaagaacaacttggtggtattcgagttagaaagtccagaacctgagctcgtg
gtgaaatcagttgaccagcaagacttcacctgtggttcgaagaatttgagtgtgcgccag
ctttag
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