Erigeron canadensis (horseweed): 122593753
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Entry
122593753 CDS
T07610
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122593753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122593753
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122593753
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122593753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
122593753
NCBI-ProteinID:
XP_043622134
LinkDB
All DBs
Position
3:complement(44243212..44251056)
Genome browser
AA seq
1193 aa
AA seq
DB search
MKQETSGGSGTVVSGRHRTTPHLPNNPDYEPLRELFSHHIQSFDHFIEYGLEKALMSIKP
IDVLDSNTQLNLRIWFEKPELYPPLKERNSKTQQYIYPVECRHAKTSYTGKFLVNVCFKY
GDGPNGAVIREKFNFGQLPIMLKSKLCHLRGADPDRLVACKEEPSEMGGYFILNGLERVV
RLLVVPKRNYPTSMVRSAFRNRREGFTDKAVVIRCVREDQSAVTVNLYYINNGSARVGFR
IRGRENLLPVGLVLKALIDTTDHEIFMSLTSVYNDKYENAKGSVGTQILGERAKIILNEV
KDLSLFTRRQCLEYIGEYFKPFMDGMERESHYAVADAVLREFILVHLDNNHDKFNLLIFM
VQKLFSFIDQTSIPDNPDALQTQEVLLPGHLVTIYVKEKLQEWLLKAKRLLQDEADNRKK
NFEFGSLADIKKALDKNPAKQVGSAVENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLR
FLSHFRAVHRGSSLAGLRTTSVRKLLPESWGFVCPVHTPDGSPCGLLNHMTASCRITSYY
DSEGKIRDFSRIQKSIFDVLVAASMIPSLPKLVKAGPPEFLHVLLDGRVVGAMPNDRVEK
AVSHLRKLKLSATSAIPEDLEVGYVPISMGGAFPGLYLFTSPARFVRPVRQKLLPAEEKN
NIELIGPFEQVYMEIECPDGGNGGRLSDFPATHEEIHPTGILSVVGNLTPWSDHNQSPRN
MYQCQMAKQTMGFSSQGINCRADQKLYHLQTPQTPIVRTATYEKYRIDDSPLGTNAIVAV
LAYSGYDMEDAMVLNKSSVDRGFAHGHIYQTESIDLADERSKSDRSNKVFRRSNLDKKTH
EFIDIEGLPYVGQRIKPGEPYYSVYNEVTSTSFNQKLKGSEPVVVDYVAVDARKQGQLQK
ANIRLRRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMT
IAMLLESIAAKGGALHGNFVDATPFSSSVKKPDGTLENESDSLVNELGSMLTARGFNHYG
VEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKKGGGI
RFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADICSICGSILTTSLIQHQKKVMREIAGL
PPGRIPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIRMTLQLSNRAGS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaaacatcaggtggttcgggcacggtggtttcagggcggcatagaacgaca
ccacatcttcccaacaatccggattacgagcctttgagggagctttttagtcatcacatt
cagtcatttgatcattttattgaatatggtttagagaaagcacttatgtctatcaaaccc
attgatgttcttgattccaacacccaattgaaccttagaatttggtttgagaaaccggag
ctgtatcctcctctaaaggaacgaaattctaagactcaacaatatatttatcccgtcgag
tgtagacatgctaaaacatcgtatactggtaagtttttagtgaatgtctgcttcaaatat
ggtgatgggcctaatggagctgtaattagagaaaagttcaattttgggcagttgcctatt
atgttgaagtcaaaactttgtcacctaagaggtgctgatcccgatagactcgtggcttgt
aaagaagaaccatcagaaatgggcgggtacttcatactaaacgggcttgagagagttgtc
cggctattagtagtgccaaaaagaaactatccgactagtatggtcagaagtgcttttcgc
aatcgaagagaagggttcacagataaagctgtggtgataagatgtgttagagaagatcaa
tcagctgtaacagtcaacttgtattatattaataatgggagtgcaagggtgggatttcgg
atccgagggagggaaaacctgttacctgtaggcctcgttttgaaggcccttatagatact
actgatcatgaaattttcatgagtttgacatcggtgtacaatgataaatacgaaaatgca
aaaggttcagttggtactcagattttgggtgaaagggctaaaattattcttaatgaagtc
aaagacctttctctatttacccgcagacaatgtttggagtacattggagagtacttcaag
ccgtttatggatggtatggaaagggaaagtcactatgctgttgctgatgctgttttgaga
gaatttatattagttcatcttgataacaatcatgataagtttaatcttctaatcttcatg
gtccaaaagcttttctcgttcattgatcaaacctctatcccagacaaccctgatgcattg
caaacacaggaagttttgctgccaggtcacttggttacgatatatgtaaaggaaaagtta
caagaatggctactgaaagctaaacgactgcttcaagatgaagctgataacagaaagaaa
aactttgagtttggtagcttagctgacattaagaaagcactggataaaaatccggcaaaa
caagttggttcagcggttgaaaatatgttaaaaactggaagattagttacacagtcgact
cttgatttaaaagagaaagctggtatgacagtccaagcagaaagactcaactttctccgt
ttcttgtcacattttagagccgttcatagaggttcatctcttgcagggcttcgcaccaca
agtgtgcgtaagctgttaccagagtcatggggttttgtatgccctgtccacacacctgat
ggctctccgtgtggactgctaaatcatatgactgcctcatgccgtattacctcttattat
gattcagaaggaaaaattagagatttttcaagaatacagaagtctatttttgatgttttg
gttgctgcatccatgatcccttccttgccgaaacttgtgaaagctggccctcctgagttt
cttcatgttttacttgatgggcgagttgttggtgcaatgcccaatgatagagttgagaaa
gcagtcagccacttacggaagttaaaactatctgcaacttcagcgatacctgaagatctg
gaggtgggatatgtacctattagcatgggcggagcgtttcctggtctctacctattcaca
agtcctgcaagatttgtccggcccgttagacagaagttgttacctgctgaagagaagaac
aatattgaactgattggtccctttgaacaggtctatatggaaatagagtgtccagatgga
ggcaatggtgggagattaagtgattttcctgccactcatgaagaaattcatccaacagga
atacttagtgttgttggcaatcttactccttggtctgatcataatcagagcccaagaaat
atgtaccagtgtcagatggcaaaacaaacaatgggtttctcttcacaaggaatcaattgt
cgtgcagatcaaaagctataccaccttcagacccctcaaaccccaattgtgcgcactgct
acatatgaaaaatataggattgacgactctccgttagggacaaatgccattgtggcagtg
ttggcttattcaggatatgatatggaagatgccatggttttaaataagtcatctgttgat
cgtggctttgctcatggtcacatttaccagactgaatctattgatttggctgatgagagg
agcaagtctgatcgttcaaataaagtatttagaaggagcaacctagataagaagacacat
gaattcattgatatagaagggctcccgtatgttgggcagaggataaaaccaggcgaaccg
tattatagtgtgtataatgaagtcacaagtacttcattcaatcaaaagttgaagggttca
gaacctgtcgtagttgattatgttgctgtggatgctagaaaacaaggacaactacaaaag
gcaaacatacgtttacgtcgtagtagaaatcctgtaattggtgataaatttagtagtaga
cacggacagaaaggtgtatgctctcaactatggcccgatgttgatatgcccttttcagga
gttactggaatgcggcctgatcttatcattaatcctcatgcatttccttcaagaatgaca
attgcaatgcttttagaatctattgctgcaaagggaggtgcattacatggaaattttgtg
gatgcaacacctttttctagctcggttaagaaaccagacggaaccttagaaaatgaaagt
gattcacttgtcaatgaacttggttcaatgttaactgcccgtgggtttaatcattatggt
gtagaagttttatacagtggattttatgggacagaattgacatgtgagatcttcattggt
cctgtatattatcaaagacttcgacatatggtttctgacaagtttcaggttaggtcaact
ggaaccgttgatcaagttacacgtcagcctataaaaggaagaaagaaaggaggtggtatc
cgatttggtgagatggaacgtgactcgcttcttgcgcatggggcagcatatttattgcat
gataggcttcacacgagttctgatcatcacatagctgacatctgctctatttgtggaagc
atccttacaacttccctcatccaacaccagaaaaaagtaatgagggagattgctgggctg
ccacctggtagaatcccgaaaaaagtgacatgtgtttcttgtcagacgagtaaaggcatg
gaaacagttgctatgccttacgtctttagatatttggcagcagaactggcggccatgaac
atacgaatgactctccaactaagtaatagagcgggttcttaa
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integrated database retrieval system
