Erigeron canadensis (horseweed): 122596295
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Entry
122596295 CDS
T07610
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122596295
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122596295
Enzymes [BR:
ecad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122596295
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122596295
2.5.1.29 geranylgeranyl diphosphate synthase
122596295
Prenyltransferases [BR:
ecad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122596295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122596295
NCBI-ProteinID:
XP_043624778
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All DBs
Position
4:6387212..6390966
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AA seq
332 aa
AA seq
DB search
MFATSITSCPHLHFPKSLSVTRQKIRCSSTTSSISTSFDLKTYWSTLREEINQKLDEAIP
VQYPSQIYESMRYSVLAKGAKRAPPVMCVAACELLGGNRLAAFPTACALEMVHAASLIHD
DLPCMDDDPSRRGKPSNHTVFGMDMAILAGDALFPLGFRHIVSHTPTNLVPETQLLRVIT
EIARAVGSTGMAAGQFVDLEGPPNAIEFIQEKKYGEMGECSAVCGGLLAGADDNQIQRLR
RYGRAVGILYQVVDDVLQAKLKKDVDNRPEEKNGKSYVGIYGIEKALKLAEDLRTEAKRE
LEGFEKYGDKVMPLYSFVDYAVDRGFSFADQV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaacgtctatcacttcctgcccccatcttcattttccaaagagtctctcagtc
actcgacaaaagattagatgttcttcaaccacatcatcaatttctaccagttttgacctt
aaaacttactggtcaactctgagagaagaaattaaccagaagcttgatgaagctatacct
gttcagtacccatctcagatttatgaatccatgcgttattcagttcttgcaaaaggggca
aaaagagcacctccagttatgtgtgttgctgcttgtgagctccttggtggcaaccgcctc
gccgccttccctactgcctgtgcccttgaaatggttcatgctgcgtctttaatccatgat
gacttaccatgcatggatgatgacccatctcgacggggtaaaccctctaatcacactgtc
tttggaatggacatggccattctagctggtgacgcgttgttcccgctagggttccgccac
attgtctctcacaccccgaccaatctcgtccctgaaacccaacttcttcgtgtcatcact
gaaattgcacgagctgtgggttccactggcatggcagcaggccagtttgtcgacttggag
ggtcccccaaatgccatagaattcattcaagaaaagaagtacggcgagatgggtgaatgc
tctgctgtttgtggaggccttctagctggtgctgatgataatcagatccaacggctaaga
agatatgggagagccgttgggattttgtatcaagtggttgatgatgtgctacaagcaaaa
ttaaaaaaggatgtggataatagaccagaagaaaagaacgggaagagttatgtgggtatt
tatggtattgagaaggctctgaaattggcagaggatcttagaaccgaggctaaaagagag
ttggaaggttttgagaaatatggtgacaaggtaatgccgttatatagttttgttgattat
gctgttgatagaggatttagctttgctgatcaggtttaa
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