KEGG   Erigeron canadensis (horseweed): 122596654
Entry
122596654         CDS       T07610                                 
Name
(RefSeq) lysine-specific demethylase JMJ30 isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecad03036]
    122596654
Enzymes [BR:ecad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122596654
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122596654
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2 TPR_2 ANAPC3 TPR_14
Other DBs
NCBI-GeneID: 122596654
NCBI-ProteinID: XP_043625206
LinkDB
Position
1:complement(58163537..58168387)
AA seq 408 aa
MTTVNSDDVLETPVLDDVAHSLLQSISEEGGYAFVRMSTRAASGDARVAEEAREMAWEQL
HSGPWHTVLPVWRDAYAMACLYVAKVLYRNGEYKEAIRVLDMGMIMGGNVLRKDLEIAIE
KATEKAKKDDEVVNGSARLITNQNAFNLMEVLQFLPKKSLSCKLVGKRSALSLEGFMRDY
FLPGSPVLLSDSMTHWPARTKWNDLSYLKKVAGYRTVPVENILQVGKNYLCTDWKQEMLT
FSEFLDRIQSNSPVVPTYLAQHPLFDQIQELRNDIVVPDYCFAGGTEMKSVNAWFGPAGT
VTPLHHDPHHNILAQVVGRKYVRLYPASFSEELYPHTESMLKNSSQVDLDNMDVNEFPKI
QDLEFLDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSASPSSPTL
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgaccactgttaactccgacgacgttttggaaacaccggtgttagatgacgtggcacac
agcctcctccaaagcatatccgaagaaggcggctacgcgttcgtgaggatgtcaacacgc
gccgcgagtggagacgcacgcgtggcagaggaggcgcgtgagatggcttgggagcagcta
cattccggtccgtggcacacggtgctgccggtgtggagagatgcttacgcgatggcatgt
ttgtatgtggcgaaagtgttgtacaggaatggtgagtataaagaggcgattagggtttta
gatatgggaatgataatgggaggaaatgtattgcgaaaggatttggagattgcgattgag
aaggcgaccgaaaaggcgaaaaaagatgatgaggttgttaatggctctgctagattgata
acaaatcaaaatgcatttaacttgatggaggtccttcagttcttacccaagaagtcattg
tcttgtaaacttgttgggaagagatctgccctttcgctggagggatttatgcgtgactat
ttcctcccaggttctcctgttttattaagtgatagtatgactcattggcccgccaggacc
aaatggaatgacttgagctaccttaaaaaggttgctggctaccgaacagttcctgtcgag
aacatcttgcaggttggaaaaaactatttgtgtactgactggaagcaggagatgttaaca
ttctctgagttccttgatagaatacagtccaacagtcctgttgtacctacttatttagcg
cagcatcccttgtttgaccagatccaagagctaaggaatgacattgttgtccctgactac
tgttttgctggtggaactgaaatgaagtctgtcaatgcttggtttggtccagctggcaca
gtaacaccgttacaccatgaccctcaccataatattcttgctcaggttgttggaaggaaa
tacgtcaggctctatccagcttcattttcagaggaactttacccacacactgaatcaatg
ctgaagaattccagccaggtcgatctggacaacatggacgtgaatgagttcccaaagatc
caagatttggaatttctggactgcattttagaggaaggggagatgctttacatccctccc
aaatggtggcactatgtccgatcgctcactacaagtctatctgttagcttctggtggagt
gcttcaccaagttcaccaaccttatga

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