KEGG T07610: 122600060

Erigeron canadensis (horseweed): 122600060

Entry

122600060         CDS       T07610

Name

(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like

K13789

geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]

Organism

ecad Erigeron canadensis (horseweed)

Pathway

ecad00900

Terpenoid backbone biosynthesis

ecad01100

Metabolic pathways

ecad01110

Biosynthesis of secondary metabolites

Module

ecad_M00366

C10-C20 isoprenoid biosynthesis, plants

Brite

KEGG Orthology (KO) [BR:ecad00001]
09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    122600060
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ecad01006]
    122600060
Enzymes [BR:ecad01000]
2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     122600060
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     122600060
    2.5.1.29  geranylgeranyl diphosphate synthase
     122600060
Prenyltransferases [BR:ecad01006]
Terpene biosynthesis
  Prenyl diphosphate synthase
   122600060

SSDB

Motif

Pfam:

polyprenyl_synt DEAD

Other DBs

NCBI-GeneID:

122600060

NCBI-ProteinID:

XP_043628646

LinkDB

Position

5:32173499..32174559

AA seq 275 aa
MPRLHLANISRIFNPTALLAYRKTTIVADVAQNLSYLDSIHSDIDSYLKKTITIREPLSV
FEPMHHLTFATPKTTASALCVAACELVGGNREDAIVAASAIHLMHAAMYAHEHLLIKGRV
GPKDIIPHQFGPNIELLIGDGILPFGFELLAGCNSASNNSEKILRVIIEITRAMGAEGMI
DDNQEIDPLIRQPSRQLHGCGAKCGAILGGGNDEEIERLKRYGVCIGKIQRLLSEMEWNE
RIKVESIEKLKVLALQELENFDSKKVEQISSIIGV

NT seq 828 nt +upstreamnt +downstreamnt
atgccccgacttcatctagcaaatatcagccgtatatttaacccaacggcactcttggct
taccgaaaaactacaatagttgccgatgtggcacaaaatctatcatacttggattccatc
cattctgatatcgactcctacttgaaaaaaacaatcacaatccgtgaacctttatcggtt
ttcgaaccaatgcaccatttgacttttgctacaccaaaaacaacggcatctgctctgtgt
gtcgccgcttgtgagctagttggcggcaacagagaagatgctattgtggctgcgtcagca
attcacttgatgcatgcggccatgtatgcccatgagcatctcttgataaagggccgagtt
gggcccaaagacataatcccacaccagtttggcccaaacattgagcttctcattggtgat
gggattttgccttttggatttgagttacttgctgggtgtaactcagcaagtaacaattct
gagaagatattaagggtgatcatagaaattacccgtgctatgggcgccgaaggaatgatc
gacgacaatcaagaaatagacccgttgattagacaaccatctcgacaactccacgggtgt
ggggcgaagtgtggagccatattgggaggtgggaacgatgaagagatcgaacggttgaaa
agatatggggtctgtataggaaagattcaacgattattaagtgaaatggaatggaatgaa
agaatcaaagtggaatcgatagagaaattgaaggttttggctctacaagagttggaaaac
ttcgatagtaaaaaggttgaacaaatttccagcattattggagtctaa

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