Erigeron canadensis (horseweed): 122602262
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Entry
122602262 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
ecad04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122602262
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122602262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122602262
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
122602262
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
122602262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
nSTAND1
AAA_16
Motif
Other DBs
NCBI-GeneID:
122602262
NCBI-ProteinID:
XP_043630909
LinkDB
All DBs
Position
1:complement(20931011..20947631)
Genome browser
AA seq
1340 aa
AA seq
DB search
MTSLQLLQLTERGRSLFSSSRRKTLLLATGIIVAGGTAAYMQSQSRIRRPNGTGELNGLG
DDHEQAELDVGNRTITKKSRQKKGLKSLQVLAAILLSHMGKLGARDLLALLATVVLRTAV
SNRLAKVQGFLFRAAFLRRVPTFVQLIIENITLCFVQSALYSTSKYITGTLSLRFRKILT
KLIHAQYFQNMIYYKMSHVDGRITNPEQRIASDVPRFCSELSDLVQEDLTAVTDGLLYSW
RLCSYASPKYIVWILAYVLGAGATIRNFSPAFGKLMSTEQQLEGEYRQLHSRLRTHAESI
AFYGGENREESHIQQKFKALVGHLKKVQHEHWWFGMVQDFLLKYLGATVAVILIIEPFFS
GTLRPDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMAIS
RELSAKDVPSLQRRGSSNYITQADYIEFDGVKVVTPSGNVLVEDLTLKVESGSNLLITGP
NGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTK
EQEVEPLTDSKMIELLKNVDLEYLLNRYPSEKEINWGEELSLGEQQRLGMARLFYHKPRF
AILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWRVNRKR
EDSLIRNGTGIESSKLKSSESERQSDAMAVQRAFENTNNESAFSSSKSQSYFSELIAVSP
SEGVVTSIPVVPQLQNDPRVLPLRIAAMFKVLVPTVLDKQGAQLLAVAVLVVSRTWISDR
IASLNGTTVKYVLEQDKAAFIRLIGVSVLQSAASSFVAPSLRHLTARLALGWRINLTSHL
LKNYLRKNAYYKVFHMSAVSVDADQRITQDLEKLSTDLSGLVTGMVKPTVDILWFTWRMK
MLTGRRGVAILYAYMLLGLGFLRSVTPDFGDLGNREQELEGSFRFMHERLRTHAESVAFF
GGGARERAMIESRFNELLAHAKVLLRKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKA
DRSLTSTQGELAHALRFLASVVSQSFLAFGDILELHRKFIELSGGVNRIFELEELLNAAQ
SDETVGTSSQSDEMHFKNEDGIFISEVDIITPSQKLLARRLTCNIVPGKSLLLTVSPNGS
GKXSVFRALRGLWPIVSGHIHKPSHNVNDVGEFNCGILYIPQKPYTCLGTLRDQIIYPLS
HDQAEKRALSLYREGQNDDVDANILDVHLRTILENVKLSYLFEREGSWEASQNWEDILSL
GEQQRLGMARLFFHKPRFGVLDECTNATSVDVEEHLYRLARDLGITVITSSQRPALIPFH
SMELRLIDGEGKWELRSIKH
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcttcagctattacagttgacggaacgaggccgttccctcttttcttccagt
cgcaggaaaacattattgctagccactgggattatagttgctggtgggactgctgcatat
atgcaatcacaaagcaggataagaaggcccaatggaactggtgaactgaatggtctggga
gatgaccatgaacaagcagagttggatgtcggtaatagaactattacaaaaaagagtaga
caaaagaaaggactaaaatcactccaggttctggctgcaattctcctatcccatatgggc
aaattgggtgcaagggaccttttagctcttctggccacagtggtgttacgaactgctgtg
agtaatagattagcaaaagttcaggggtttctgttccgtgctgcttttcttcgacgtgtg
ccaacttttgttcagctgattattgaaaacattaccttatgttttgttcaatctgctttg
tattctacatccaagtatataacagggaccttgagcttgaggttcagaaaaatattgaca
aagcttatacatgcccaatattttcagaatatgatatattacaaaatgtctcatgttgat
ggacgaataactaatcctgagcaaagaattgccagtgatgtacccaggttctgctcggaa
cttagtgatcttgtacaggaagatcttactgcagttactgatggccttttatattcctgg
cgtctgtgttcttatgcaagtcccaagtacatagtttggatattggcatatgtgctagga
gccggagccaccattagaaacttctctcctgcatttggaaagttgatgtcaacggaacaa
caacttgaaggtgaatatcgacaactacactcaaggttaaggactcatgcagaaagcata
gcattttatggcggtgagaatagagaagaatcgcacatccagcagaagtttaaggcactt
gttgggcatctgaaaaaagtccaacatgaacattggtggttcggcatggtccaagatttc
ttgttaaagtatcttggagctactgtagctgtcatcctaattatagagcctttcttttct
ggaactttacggccagacacctcaactttaggacgagcagaaatgctgagcaatctgaga
tatcacaccagtgtgataatctctctatttcagtccttgggaactctctccattagttct
agacggcttaatcgtttaagtggttatgcggaccgtattcatgaacttatggctatatcc
agagaattaagtgcaaaagatgtaccgtctttacaacgaagagggagcagtaattatata
acccaggcagattacatagagtttgatggagtcaaggtggttacccccagtggtaatgtt
ttggtggaagacctgaccttaaaggttgaatcagggtcgaatcttttaattacaggacca
aatggtagtggtaaaagctcactattccgggttttgggtggcctgtggcctttggtgtct
ggtcatatagtgaaacctggggttggttcggatctcaataaagagattttctatgttccc
cagcgtccttacaccgcagtaggaactctacgtgaccagttgatatatccccttaccaag
gaacaagaagttgaacctctcactgacagcaaaatgattgagctgttgaaaaatgttgac
cttgagtatttattaaatcgctacccatcagaaaaagagataaattggggagaggagttg
tctcttggggagcagcaaaggttgggaatggcaagacttttctatcacaaacccagattt
gcaattcttgatgaatgcacgagtgccgtgacaactgatatggaagaacgcttttgtgct
aaagttcgagctatgggaacgtcctgcatcactatatctcatcgacctgctcttgttgca
ttccatgatgtggtgttgtcattggacggagaaggtggttggagagttaatcgcaaaagg
gaggattccctaattcgtaatggtactggtattgagtcttctaaactgaagtcatctgaa
tcagaacgtcaaagtgatgctatggcagtgcaacgtgcatttgaaaatacaaacaatgaa
tctgcgttttctagttccaagtcacagtcatatttttcagagttaatagctgtgtcccca
tccgagggtgttgttacttctattcctgttgtaccacaactgcaaaatgatccccgggta
ctgccattaagaatagctgcgatgtttaaagtactggtgccaacagtactagataaacaa
ggagcccaacttcttgctgttgccgttcttgtagtttcaagaacatggatatcagatcgc
atagcttctttaaatggaacgactgtgaagtatgttttggagcaagataaagcagccttc
atacggttgattggtgttagtgtccttcaaagtgcggcttcatcatttgttgcaccttct
ttgaggcatttgactgccagacttgcactaggatggaggatcaacttgacttcacactta
ctaaagaattacttgaggaagaatgcatattacaaggtatttcacatgtcagcagttagt
gttgatgcagatcagagaataacacaagacctggaaaagttaagcactgatttatcaggg
ctggtgacaggaatggtaaagccaactgtcgatatactatggttcacatggagaatgaaa
atgttaaccgggcgccgtggtgttgctatactctatgcgtatatgttactagggttaggc
tttctaaggagtgtcactccagattttggtgacctaggaaatcgggaacaagaacttgaa
ggaagctttaggttcatgcatgagaggctgcgtacccatgctgagtctgttgcgtttttc
ggaggtggtgctcgagaaagagcgatgattgagtcaagatttaatgagcttctggctcat
gccaaagttctactgaggaagaaatggttatttggcatactggatgattttgttacgaaa
caactgcctcacaatgttacttggggattgagcttgttatatgccatggagcacaaagct
gaccgttcattgacctccactcaaggtgagctggcacatgcattgcggtttttggcatct
gttgtatctcaaagcttcttggcttttggtgacattctggagctgcatagaaagttcatt
gaactctctggtggtgttaatcggatttttgaacttgaagagcttctcaatgctgcacaa
tctgatgagactgttggcacttcatcacagtccgatgagatgcatttcaaaaatgaggac
ggtatctttatttcggaggttgatataattacgccatcacagaaattgttagcaaggagg
ttgacgtgtaatatagtaccagggaaaagccttcttcttactgttagtccaaatggtagt
gggaaangttcggtgttcagggctcttcgtggtctttggcctattgtcagtggacacatt
cataaaccttcccacaatgttaatgatgttggtgaattcaattgtggtatattatacatt
ccccagaaaccgtatacttgtttgggaacattacgagatcaaattatctatcctctctca
catgaccaagcagaaaagagggcgttaagtttgtatcgagaagggcaaaacgatgatgtt
gacgcaaatattctggatgtgcatctcagaacaattctagagaatgtgaaattatcttac
ctttttgaaagggaaggaagctgggaggctagtcaaaactgggaagacatcctttctctt
ggggaacaacagagattaggcatggcccggttattctttcacaagcctcggtttggtgtc
cttgatgaatgcaccaatgctacaagtgtggatgttgaagagcacctttataggcttgca
cgtgatctaggcattacggttattacatcatcacagcgtcctgctttaataccattccac
tctatggaattgcgattgatcgatggagaaggaaagtgggagcttcggtccatcaagcat
tga
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integrated database retrieval system
