Erigeron canadensis (horseweed): 122605419
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Entry
122605419 CDS
T07610
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122605419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122605419
04147 Exosome [BR:
ecad04147
]
122605419
04090 CD molecules [BR:
ecad04090
]
122605419
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122605419
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122605419
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122605419
CD molecules [BR:
ecad04090
]
Proteins
122605419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_21
ABC_ATPase
AAA_15
AAA_30
DLIC
SbcC_Walker_B
AAA_23
AAA_28
Motif
Other DBs
NCBI-GeneID:
122605419
NCBI-ProteinID:
XP_043634304
LinkDB
All DBs
Position
6:33390369..33398969
Genome browser
AA seq
1243 aa
AA seq
DB search
MLKMSNKKTNKKAARNNGSFRSLFMHADVADMFLMGFGLFGAIADGFEVPTLLFISCALM
NSVGNFSSISTNVFIGRINKNAEYLCYLAIGKFVACFIEGYCWTRTAERQTSRLRTTYLK
AILRQEVAYFDLNVTCTAEIVTTVSSDSLIIQEFISEKLPVFVMNVAGFCGAYIMSFMLL
WRLAIVGLPFIIILVIPGLIYGRVLVSLSRQIREEYNNAGVVVEQAISSVRTVYSFVRES
KTIREYSAALQGTMKLGINQGLAKGLAMGSNSGVVFAVWSFICWYGSRLVMYHGAKGGIV
FGVGSSITYGGLSLGAGLSNVKYFSEAMAASERIRGLIKRVPKIDSEDMEGEILQEVFGE
VEFKSIKFAYPSRLESVIFEDFNLKLPAGKTMALVGGSGSGKSTVISLLQRFYDPQEGEI
CLDGVRIDKLQLKWIRSQMGLVSQEPALFATTIKGNILFGKEDATMEEVIEAAKVSNAHN
FISQLPQAYETQVGERGIQMSGGQKQRIAIARAIIKSPRILLLDEATSALDSESERVVQE
ALDSVAVGRTTIIIAHRLSTVRNADMISVVQNGRLVESGSHDELIQLENSFYKSLVHLQE
KKQNTETLHKCPLDSSTHYVHNKSSRQQLIVSRSSSTNSGNRGEQNFISQANQEIPVPTF
KRLLAMNIPEWKQALFGSVGAILFGAIQPLYAFSMASMMCVYFLPDHDDIRHKTMIHALC
FIGLAVCSMLINIVQHYNFAAMGEHLTKRVRERMLLKILAFEIGWFDQDENSSGAICSRL
ATDANVVRSLVGDRCSLLIQAFSAVTIAFTMGLVIAWRLAIVMIAVQPLIIICFYYRKIL
LKNMSEKAMKAQDESSKLAAEAVSNLRTVTAFSSQTRILKMLKETQKEPMHESIRQAWYA
GFGLGFSQSLIACTWALAFWYGGRLISGGHLGIKPFLQSFFILVSTGRVIAEAGTMTNDL
AKGSDAVKSVFALLDRYTLIDPEDPNGNKPEIITGHIEMQDIDFVYPARPNISIFKGFSV
TIEAGKSTALVGQSGSGKSTIIGLIERFYDPVKGIVEVDGRDIRSYHLRTLRKYIALVSQ
EPSLFSGTIRENIIYGASENVSESEIIEAAKAANAHDFIAVLKDGYDTWCGDRGVQLSGG
QNQRIAIARAILKNPTVLLLDEATSALDSQSENIVQEALERMMVGRTSVVVAHRLSTIQS
CDTIAVLEKGKVVEKGNHRTLLAKGAPGAYYSLVNLQKPISNH
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatgagtaacaaaaaaacaaataagaaagcagctagaaataatggatcattc
cgatcgcttttcatgcatgcagacgttgccgatatgtttctcatgggtttcggacttttc
ggtgccatcgccgatggatttgaggttccaacgttgttgtttatttcttgcgcccttatg
aacagcgttggaaacttttcttctatatccaccaatgtcttcattggcagaatcaataag
aatgcagaatatctttgttacttggccattggaaaattcgttgcatgttttattgagggg
tattgttggacaagaacagcagagagacagacctcacgattgagaacaacttatttaaaa
gcaattttaagacaagaagtggcctattttgacttgaatgttacatgcacagctgaaatc
gttactactgtttcgagtgatagcctcatcattcaagaattcatcagcgaaaagttgccg
gtgttcgtgatgaatgtggcgggcttttgtggagcatatattatgtcatttatgttacta
tggaggctagcaattgttgggcttccatttatcatcattttagtgatccctggtctgatt
tatggaagagttttagttagcttatcaagacaaatcagggaggagtataataatgctggt
gttgtcgtggagcaagcgatatcttctgtaaggacagtttattcgtttgttcgtgaaagc
aagaccattagagagtattctgctgctttacagggaacaatgaagttaggtataaatcag
ggtttggctaagggattggcaatgggcagcaatagtggcgtcgtttttgctgtttggtct
ttcatatgttggtacggtagtagattggttatgtaccatggagctaaaggtggaatcgtg
tttggtgtcggaagttctattacatatggtggactatcattgggtgctggattgtcaaat
gtcaagtatttttcagaggcaatggctgcaagtgaacgtataaggggattgataaaaaga
gttccgaagatagactcagaagacatggaaggggagatattacaagaagtctttggggaa
gtagaattcaagagcataaagtttgcctacccatcgaggctggagtcagtgatatttgaa
gactttaacttaaagcttccagcagggaagacaatggcattggtaggcggtagtgggtca
ggtaaatcaacggtgatttcattgttacaaagattttatgatcctcaagaaggagagatt
tgtttagatggggtgaggattgacaagcttcaactaaagtggataagatcacaaatgggt
ttggtaagtcaagagcctgctctatttgctaccaccataaaagggaacatactttttggt
aaggaagatgccactatggaagaagtcattgaggctgcaaaagtttcaaatgctcataac
ttcatctcccagttgccccaggcttatgaaacccaggttggtgaaagaggaattcaaatg
tcaggtgggcaaaagcaaaggatagcaattgcacgtgccataatcaagtcgcctcgtatt
cttctcttggatgaggcaacaagtgcactagattctgaatctgaacgggtcgtgcaggag
gcacttgatagtgtggcagttggtcgaaccaccattatcatagctcatcgcctttcaaca
gttagaaatgcagacatgatatcagtggtccaaaatggccggttagtagagtctggctcc
catgatgaactcattcaacttgaaaacagtttctacaaatcactcgttcacctccaagaa
aaaaagcaaaacactgaaaccctacacaaatgtccattggactcctccacacattatgtc
cacaacaagagcagccgtcagcaactgattgtgagcaggtcgagttccacaaactcaggc
aaccgtggtgaacaaaactttatctcgcaggccaaccaagaaattccagtgcctacattt
aagaggctattagcaatgaacattcctgaatggaagcaagcattgtttgggagtgtgggt
gcgattttgtttggtgctattcagccactttatgctttctcgatggcgtcaatgatgtgc
gtgtattttttgccagatcatgacgatatcaggcataaaacgatgattcatgcattgtgt
ttcattggtttggcagtttgttcaatgctaatcaatatcgttcagcattataactttgca
gccatgggagagcacttaacaaagagagtacgagaaaggatgttgttaaagatactcgcc
tttgaaattgggtggttcgaccaagatgaaaactcaagcggggcaatttgttcaaggctt
gctacagatgccaatgtggtgcggtctttggtgggtgatcgatgctcacttctaatacaa
gcattctctgcagtaacaattgccttcacgatggggctggtgatcgcatggagattggct
atagttatgattgcagttcaaccactaataatcatatgcttctattatagaaaaattctt
ttaaaaaacatgtcagagaaagccatgaaagcacaagatgaaagcagcaagcttgcagct
gaagctgtctcaaatttacgtacggtgactgccttttcatcccaaacacgaatactcaaa
atgctcaaagagacccaaaaagagccaatgcatgaaagcatccggcaagcttggtatgct
ggatttggactcgggttttcacaaagccttatagcttgtacttgggctctagccttttgg
tatggtgggagattgattagcggtggtcatcttgggatcaaaccatttctccagtcgttt
tttatcttggtaagcacggggagggtcattgcagaagcagggaccatgacaaatgatctg
gccaaagggtctgatgcagtgaagtctgtgtttgcattattagaccgttacaccttgata
gatcctgaggaccccaatggtaacaagccagagatcattacagggcatatagagatgcaa
gatattgactttgtgtaccccgctcggcctaacattagtatcttcaaaggattttcagtc
actattgaagcaggtaaatcaactgcgttggtcggacaaagtgggtctgggaagtcaacc
ataattgggttaatcgagcgtttttatgacccggtgaagggtattgttgaagttgatgga
agggatataaggtcttaccatttaagaacactgaggaagtatattgcactcgtgagccaa
gagccatcactgttctccggtaccatacgtgaaaacatcatatacggtgcttccgaaaat
gttagtgaatcagagattatagaggctgcaaaagcagccaatgctcatgatttcatagca
gttttaaaagacgggtatgatacttggtgtggtgatcgaggggtacaactttctggagga
caaaaccaacgcattgccatagcccgtgctatactgaaaaatccaacagttttgttacta
gacgaagcgactagtgcacttgatagccagtctgagaatatagtgcaagaagctctcgag
cgaatgatggtggggcggacaagtgtggtggtggcacaccggttaagtacaatacaaagt
tgtgacactattgcagttttggagaaagggaaagtggttgagaaaggtaaccatcggacg
ttgctagcaaaaggggcgccaggagcttactactccttggtcaatctgcaaaagcctatt
tctaatcactga
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