Erigeron canadensis (horseweed): 122607982
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Entry
122607982 CDS
T07610
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03022
Basal transcription factors
ecad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122607982
09124 Replication and repair
03420 Nucleotide excision repair
122607982
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecad01001
]
122607982
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122607982
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122607982
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122607982
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
122607982
2.7.11.23 [RNA-polymerase]-subunit kinase
122607982
Protein kinases [BR:
ecad01001
]
Serine/threonine kinases: CMGC group
CDK family
122607982
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122607982
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122607982
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122607982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
122607982
NCBI-ProteinID:
XP_043636999
LinkDB
All DBs
Position
7:37192213..37197570
Genome browser
AA seq
406 aa
AA seq
DB search
MGDVEQLFTKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPSIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPTDIKSYIQ
MTLKGLAVCHKKWVLHRDMKPNNLLIGPGGQLKLADFGLARIFGSPNRKFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKESQWKD
MKYLPDYVEYQVVHGQSMKTLFPMASEDAVDLLSKMFAYDPKARISAQQALEHRYFLSGP
PPTEPALLPRPPPKKESVDSKPSDFGPTVLSPTIKSKRVISHPEGHVEKFEDHGIGNEQS
GPAPMSLDFSVFDARPPRRPTINSADRTHLKRKLDLEFQIPEQEDY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtggaacagttatttacaaaaaaggtagctgatcgatatttgaaacgcgaa
gttctcggtgaaggaacttatggtgttgtctataaagccattgatactaagacaggacaa
actgttgcaatcaagaaaatccgtcttgggaagcagaaggaaggggtgaattttactgct
cttagagaaataaagttactgaaagagctcaaagatcccagcataatagagctgattgat
tgttttccacataaaggcaacttacatcttgtgtttgaatttatggagactgatctagaa
gctgtaattcgggataggaacattgttctgtcgccaactgatataaagtcatacattcag
atgacattaaaaggacttgctgtttgccataagaaatgggtactacatagggatatgaaa
ccgaataatctcttgataggacctggtggacaactaaaacttgcagattttggtttggca
cgcatatttggtagtcccaacagaaaattcactcaccaggtctttgctcgatggtataga
gcacctgaattattatttggtgcgaagcagtatggtcctggggtcgatgtatgggcagca
gcttgtatatttgctgagctccttctacgccggccttttctgcagggtagcagtgacatc
gatcaattgggcaaaatttttgctgctttcggcactcccaaagaatcgcagtggaaagat
atgaaatatcttccagattatgttgagtaccaggttgttcatgggcagtcgatgaagaca
ttgtttccaatggccagtgaagatgcagtagatctattatccaaaatgttcgcatatgat
ccaaaggccagaatttcagcacagcaggcattagaacataggtacttcttgtctggacct
ccacctactgaaccagctttgcttccacgacctccaccaaaaaaggagtctgtagactca
aagccctcagattttggtccgactgtgctatcacctacaataaagtcaaaaagagtgatc
tcacacccagaaggccatgttgaaaagtttgaggaccatggcattggtaatgaacaaagt
ggacctgcaccaatgtcactagatttttcagtttttgatgcaaggcctccacgtagacca
acaataaacagtgctgacagaacacatctgaagagaaaactagatcttgaattccaaatc
cctgaacaggaagattattga
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